Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 AP000620.1-201ENST00000527147 504 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 MIR4701-201ENST00000583094 63 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AL139099.4-201ENST00000614802 114 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC012676.3-201ENST00000614983 479 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC073488.3-201ENST00000631611 778 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 UGT2B24P-201ENST00000514441 1597 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC117409.1-201ENST00000470499 1310 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 RN7SKP77-201ENST00000363261 353 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC121334.1-201ENST00000396414 802 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 RPL35AP3-201ENST00000414680 288 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC092865.3-201ENST00000425390 1026 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC099782.1-201ENST00000425889 474 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC023141.3-201ENST00000436698 278 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 BMS1P10-201ENST00000443754 1120 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC023271.1-201ENST00000445936 1090 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 RN7SL269P-201ENST00000467795 305 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC092865.4-201ENST00000477936 615 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 HMGN1P17-201ENST00000513734 295 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC021146.10-201ENST00000515628 706 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 LSM1P2-201ENST00000604911 322 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC073389.3-201ENST00000609434 935 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 AL135999.3-201ENST00000610501 812 ntBASIC6.24□□□□□ -1.41
CCDC42Q96M95 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC42Q96M95 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC42Q96M95 AC109446.4-201ENST00000623235 2755 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AL022311.1-201ENST00000623726 19416 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 OR10T1P-201ENST00000424327 947 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 LINC00328-2P-201ENST00000436585 219 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 MTND2P40-201ENST00000436718 841 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC108751.3-201ENST00000461814 1020 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC113191.1-201ENST00000517759 403 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 DPPA3P2-202ENST00000557188 1219 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC007346.1-201ENST00000569208 867 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 WBP1LP11-201ENST00000586141 328 ntBASIC6.23□□□□□ -1.41
CCDC42Q96M95 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC42Q96M95 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 277.2 ms