Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 RPL5P20-201ENST00000403848 896 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 MTCO3P31-201ENST00000405526 789 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AL354794.2-201ENST00000424795 1248 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 NPM1P30-201ENST00000425092 828 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC005534.2-201ENST00000431047 433 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 FTH1P20-201ENST00000434913 548 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AL954705.1-201ENST00000435277 559 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 OR7E7P-201ENST00000455678 1012 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 SRP68P2-201ENST00000456184 254 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ST13P14-201ENST00000474095 734 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC008629.3-201ENST00000505786 586 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 MTATP6P22-201ENST00000507369 598 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AL583832.1-201ENST00000603227 784 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 MIR1264-201ENST00000616374 69 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 MIR665-201ENST00000635949 72 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 AC126773.4-201ENST00000612545 3043 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC068860.1-201ENST00000623701 3736 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC079777.1-201ENST00000623836 1953 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AL590084.1-201ENST00000407885 387 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC027644.1-201ENST00000419595 298 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 RPL31P11-202ENST00000454082 372 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 FTH1P23-201ENST00000492727 550 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 OR5AM1P-201ENST00000532136 1032 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 OR11H3P-201ENST00000554547 982 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.56□□□□□ -1.04
TRIM47Q96LD4 BPTFP1-201ENST00000579209 492 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 MIR5682-201ENST00000584864 76 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.56□□□□□ -1.04
TRIM47Q96LD4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms