Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 IGLV2-28-201ENST00000520681 304 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 IGKV2-18-201ENST00000522607 343 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC091078.2-201ENST00000557145 559 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC067852.5-201ENST00000589299 310 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC005520.3-201ENST00000602874 370 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC211433.2-201ENST00000608433 387 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 MIR6798-201ENST00000612887 67 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC116667.2-201ENST00000641075 823 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 OR8G3P-202ENST00000641572 1255 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC011455.2-201ENST00000599320 3336 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 WDR95P-201ENST00000425638 1542 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 NEPNP-201ENST00000404786 1371 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL078595.2-201ENST00000605309 1780 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AP000547.3-204ENST00000588548 2523 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 Z83820.1-201ENST00000456978 1499 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 RN7SKP160-201ENST00000363804 340 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC245884.2-201ENST00000426257 404 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 MTCO1P57-201ENST00000432182 261 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 GAPDHP75-201ENST00000433910 943 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 SNX18P26-201ENST00000458433 740 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 RN7SL515P-201ENST00000463999 297 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 RPL5P12-201ENST00000477071 851 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC016687.1-201ENST00000482574 353 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 MIR4301-201ENST00000577203 66 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL589674.2-201ENST00000604304 337 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL008723.3-201ENST00000608926 449 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 OR7M1P-201ENST00000608946 533 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL162574.2-201ENST00000614618 657 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 MIR6730-201ENST00000622213 67 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC022034.1-201ENST00000512867 2156 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 NEK2P2-201ENST00000438441 1338 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
HERC6Q8IVU3 AC025809.2-201ENST00000625085 1802 ntBASIC6.69□□□□□ -1.34
HERC6Q8IVU3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 OR9K1P-201ENST00000326513 941 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 SNORA58B-201ENST00000364259 136 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AL122020.1-201ENST00000472287 459 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.68□□□□□ -1.34
HERC6Q8IVU3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 SNORA58-201ENST00000505219 137 ntBASIC6.68□□□□□ -1.34
HERC6Q8IVU3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms