Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL356057.2-201ENST00000403318 432 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 MIR1275-201ENST00000408770 80 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC012498.1-201ENST00000424037 437 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 GAPDHP51-201ENST00000426454 1000 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC010975.2-201ENST00000427781 588 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL136231.1-201ENST00000429407 730 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 RPSAP40-201ENST00000442343 891 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 RPL23AP23-201ENST00000452590 471 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 MTND1P11-201ENST00000456661 876 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 RNA5SP278-201ENST00000517055 102 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC123904.3-201ENST00000547218 814 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 RPL29P33-201ENST00000587474 316 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 KC877982.1-201ENST00000602313 470 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 U73023.1-201ENST00000603134 700 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC006270.3-201ENST00000605967 1036 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC007014.2-201ENST00000615581 479 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC089999.3-201ENST00000622440 577 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 DUXAP9-208ENST00000622815 614 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AC091305.2-201ENST00000624049 1576 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL133320.1-201ENST00000621423 2352 ntBASIC8.93□□□□□ -0.98
RC3H1Q5TC82 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.93□□□□□ -0.98
RC3H1Q5TC82 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC051619.3-201ENST00000560646 2426 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AL031123.3-201ENST00000623345 1837 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC004014.2-201ENST00000623718 5122 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC010132.4-201ENST00000569883 1368 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 SNORD116.1-201ENST00000365628 92 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RNU6-157P-201ENST00000383957 107 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC079807.1-201ENST00000429993 481 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 OR6R1P-201ENST00000431838 940 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RPSAP32-201ENST00000432681 526 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC234771.2-201ENST00000445718 597 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 MTCYBP17-201ENST00000503579 789 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC087752.2-201ENST00000521219 281 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC004923.2-201ENST00000529649 369 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AC011611.5-201ENST00000552477 578 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ZNF519P2-201ENST00000557032 169 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ROCK1P1-201ENST00000573767 549 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.92□□□□□ -0.98
RC3H1Q5TC82 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms