Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC011815.2-201ENST00000618230 2021 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 RNA5SP131-201ENST00000365452 119 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 RANP2-201ENST00000456833 229 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 EPS15P1-202ENST00000459691 2071 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 IQCB2P-201ENST00000401788 1633 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 MFSD8-219ENST00000641228 2559 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 RNA5SP335-201ENST00000363817 110 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 RNA5SP478-201ENST00000364657 115 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 CHMP1B2P-201ENST00000399581 597 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 NRBF2P2-201ENST00000413087 861 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 COX6B1P1-201ENST00000415962 213 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 RPL18P10-201ENST00000425606 538 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 LDHBP2-201ENST00000456969 1005 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC022215.1-201ENST00000481770 362 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC092824.1-201ENST00000483524 576 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 RPEP1-201ENST00000504507 658 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 RBM22P1-201ENST00000578589 1214 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AL132640.3-201ENST00000630473 177 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 OR11H2-202ENST00000641517 1085 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 XRCC6P5-201ENST00000435236 1795 ntBASIC5.09□□□□□ -1.59
LRRK2Q5S007 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRRK2Q5S007 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LRRK2Q5S007 AL034546.1-201ENST00000623740 3693 ntBASIC5.09□□□□□ -1.6
LRRK2Q5S007 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.09□□□□□ -1.6
LRRK2Q5S007 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
LRRK2Q5S007 HSPA8P18-201ENST00000439846 1928 ntBASIC5.09□□□□□ -1.6
LRRK2Q5S007 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
LRRK2Q5S007 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC5.09□□□□□ -1.6
LRRK2Q5S007 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.09□□□□□ -1.6
LRRK2Q5S007 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
LRRK2Q5S007 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LRRK2Q5S007 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
LRRK2Q5S007 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LRRK2Q5S007 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LRRK2Q5S007 AC126755.2-208ENST00000327792 462 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC138969.1-213ENST00000331436 462 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 DUTP5-201ENST00000406790 469 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC245028.1-201ENST00000423259 256 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC115837.1-201ENST00000517662 1001 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 AC130456.6-201ENST00000623745 765 ntBASIC5.08□□□□□ -1.6
LRRK2Q5S007 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRK2Q5S007 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRK2Q5S007 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRK2Q5S007 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
LRRK2Q5S007 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRK2Q5S007 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms