Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 HLA-DPA3-207ENST00000454398 229 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 RPL12P39-201ENST00000455456 496 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC060775.1-201ENST00000518241 520 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AP001267.4-201ENST00000602598 545 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 FO681491.1-202ENST00000623392 737 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN20Q4JDL3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AC011933.2-201ENST00000578539 2790 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 OR2W4P-201ENST00000406496 926 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 MIR1203-201ENST00000408812 85 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AL357752.1-201ENST00000412817 349 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AL590399.2-201ENST00000427536 309 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AC105384.2-201ENST00000508433 640 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 GAPDHP71-201ENST00000511530 1003 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 AC022919.1-201ENST00000624979 626 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 KYNUP3-201ENST00000574386 1341 ntBASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN20Q4JDL3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 RNA5SP91-201ENST00000390902 119 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC115283.1-201ENST00000427353 400 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 CRIP1P1-201ENST00000427567 185 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 ST13P12-201ENST00000508958 1094 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC006499.4-201ENST00000510947 694 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 HMGN2P36-201ENST00000529541 409 ntBASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN20Q4JDL3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms