Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 OR3D1P-201ENST00000438288 955 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX4Q33E94 RN7SL393P-201ENST00000463588 296 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX4Q33E94 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.47□□□□□ -1.53
RFX4Q33E94 RNU2-45P-201ENST00000516068 187 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 RNA5SP434-201ENST00000516647 121 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX4Q33E94 CCDC58P1-201ENST00000578567 430 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFX4Q33E94 MIR212-201ENST00000586026 110 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AP001823.1-201ENST00000604056 1003 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.47□□□□□ -1.53
RFX4Q33E94 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.47□□□□□ -1.53
RFX4Q33E94 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RFX4Q33E94 AC015689.2-201ENST00000528172 1738 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RFX4Q33E94 AC002525.1-201ENST00000624392 1622 ntBASIC5.47□□□□□ -1.53
RFX4Q33E94 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RFX4Q33E94 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RFX4Q33E94 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
RFX4Q33E94 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
RFX4Q33E94 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
RFX4Q33E94 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RFX4Q33E94 AC004158.1-201ENST00000564508 4319 ntBASIC5.46□□□□□ -1.53
RFX4Q33E94 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 YWHAZP4-201ENST00000392459 708 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 RPS7P8-201ENST00000418311 581 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 OR10T1P-201ENST00000424327 947 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC095052.1-201ENST00000509955 863 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 SNORA70.11-201ENST00000515987 138 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 SNORA70.13-201ENST00000516116 138 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.46□□□□□ -1.54
RFX4Q33E94 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC063977.7-201ENST00000594454 337 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC022001.1-201ENST00000605193 268 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 HIRAP1-201ENST00000605318 787 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 MIR6885-201ENST00000612241 66 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 GAPDHP41-201ENST00000613707 975 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.46□□□□□ -1.54
RFX4Q33E94 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
RFX4Q33E94 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
RFX4Q33E94 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 EIF3EP1-201ENST00000433978 1316 ntBASIC5.46□□□□□ -1.54
RFX4Q33E94 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RFX4Q33E94 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX4Q33E94 RPL11P4-201ENST00000332269 436 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 RNA5SP77-201ENST00000365394 120 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 RNU1-136P-201ENST00000384181 164 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 GPS2P1-201ENST00000411761 986 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.45□□□□□ -1.54
RFX4Q33E94 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 REREP1Y-201ENST00000422655 198 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 GAPDHP19-201ENST00000431768 1005 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 REREP2Y-201ENST00000439103 200 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 PA2G4P1-201ENST00000442248 1197 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.45□□□□□ -1.54
RFX4Q33E94 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX4Q33E94 AC083795.1-201ENST00000491760 320 ntBASIC5.45□□□□□ -1.54
RFX4Q33E94 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.45□□□□□ -1.54
RFX4Q33E94 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX4Q33E94 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 502.1 ms