Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CHRNB3Q05901 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CHRNB3Q05901 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CHRNB3Q05901 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CHRNB3Q05901 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 RNU105B-201ENST00000364478 208 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC112492.2-201ENST00000432774 1030 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 FRG2FP-204ENST00000453982 852 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 RN7SL362P-201ENST00000494228 267 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC084824.2-201ENST00000548906 345 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AL133243.2-201ENST00000610331 1621 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 uc_338.26-201ENST00000612659 160 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC022106.1-201ENST00000612834 766 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AL683826.1-201ENST00000624104 627 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC005618.4-201ENST00000625053 554 ntBASIC5.61□□□□□ -1.51
CHRNB3Q05901 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CHRNB3Q05901 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNB3Q05901 AC005005.4-201ENST00000623789 16698 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 RNU1-65P-201ENST00000363919 148 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC087752.1-201ENST00000391360 558 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 RPL21P50-201ENST00000417698 477 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 RPS15AP30-201ENST00000420976 390 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC099782.1-201ENST00000425889 474 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 CRIP1P1-201ENST00000427567 185 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AL512593.1-201ENST00000444758 779 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 POU5F1P5-201ENST00000445059 658 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 RN7SL552P-201ENST00000462094 276 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC108103.1-201ENST00000511286 446 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 RNA5SP473-201ENST00000516402 125 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC090424.1-201ENST00000535243 736 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AL589765.6-201ENST00000601909 549 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC125494.2-201ENST00000602431 657 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 AL513327.3-201ENST00000602618 469 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CHRNB3Q05901 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC109446.4-201ENST00000623235 2755 ntBASIC5.6□□□□□ -1.51
CHRNB3Q05901 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNB3Q05901 AC026523.2-201ENST00000625039 7739 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms