Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3AP84243 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 RNA5SP433-201ENST00000364491 114 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC004386.1-201ENST00000393214 761 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 SNRPEP6-201ENST00000407465 277 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 RPS4XP5-201ENST00000419038 768 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3AP84243 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
H3F3AP84243 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 AL603882.1-201ENST00000463059 681 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC025458.1-201ENST00000506046 166 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 TOMM22P4-201ENST00000511318 336 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3AP84243 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC027369.2-201ENST00000528030 440 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC006115.2-201ENST00000596823 202 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC145423.1-201ENST00000605712 336 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AL445670.1-201ENST00000618889 801 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 AC069234.4-201ENST00000621276 412 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.31□□□□□ -1.56
H3F3AP84243 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC025470.1-201ENST00000510053 2032 ntBASIC5.31□□□□□ -1.56
H3F3AP84243 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3F3AP84243 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.31□□□□□ -1.56
H3F3AP84243 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
H3F3AP84243 AC022164.1-201ENST00000568767 2673 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3AP84243 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
H3F3AP84243 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 AF287957.1-201ENST00000607368 1595 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
H3F3AP84243 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
H3F3AP84243 RN7SKP128-201ENST00000364270 303 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 U3.23-201ENST00000391132 200 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AL121977.1-201ENST00000401636 979 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 BX284632.2-201ENST00000421091 399 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 RPS12P17-201ENST00000438591 377 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AL512605.1-202ENST00000441919 381 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AL359955.2-201ENST00000445380 353 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AL359839.1-201ENST00000451975 1160 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AC108751.3-201ENST00000461814 1020 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3AP84243 PFN1P6-201ENST00000476786 399 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 SETP21-201ENST00000514799 892 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 RN7SKP288-201ENST00000516227 268 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3AP84243 NPM1P5-201ENST00000557228 838 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 AC090826.1-203ENST00000569235 490 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.3□□□□□ -1.56
H3F3AP84243 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.3□□□□□ -1.56
H3F3AP84243 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.3□□□□□ -1.56
H3F3AP84243 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.3□□□□□ -1.56
H3F3AP84243 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.3□□□□□ -1.56
H3F3AP84243 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3F3AP84243 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3F3AP84243 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms