Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 NPM1P38-201ENST00000403835 865 ntBASIC4.92□□□□□ -1.62
LMO4P61968 RN7SKP151-201ENST00000410230 316 ntBASIC4.92□□□□□ -1.62
LMO4P61968 RN7SKP293-201ENST00000411389 296 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 RPS4XP5-201ENST00000419038 768 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC244453.4-201ENST00000419150 388 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.92□□□□□ -1.62
LMO4P61968 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.92□□□□□ -1.62
LMO4P61968 AC099677.3-201ENST00000427081 395 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.92□□□□□ -1.62
LMO4P61968 OR52A4P-202ENST00000481634 799 ntBASIC4.92□□□□□ -1.62
LMO4P61968 OR2A3P-201ENST00000493774 953 ntBASIC4.92□□□□□ -1.62
LMO4P61968 OR52A4P-203ENST00000498233 1014 ntBASIC4.92□□□□□ -1.62
LMO4P61968 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 RNU6-1334P-201ENST00000516032 105 ntBASIC4.92□□□□□ -1.62
LMO4P61968 RN7SKP5-201ENST00000517045 272 ntBASIC4.92□□□□□ -1.62
LMO4P61968 CYCSP22-201ENST00000517555 339 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 OR5D2P-201ENST00000524390 911 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 HMGN2P36-201ENST00000529541 409 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 AC092451.2-201ENST00000538746 658 ntBASIC4.92□□□□□ -1.62
LMO4P61968 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 SNORD95-201ENST00000579879 68 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AP001496.3-201ENST00000580230 913 ntBASIC4.92□□□□□ -1.62
LMO4P61968 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 AL713998.2-201ENST00000604538 1198 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC145423.1-201ENST00000605712 336 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.92□□□□□ -1.62
LMO4P61968 AL354696.1-201ENST00000614652 497 ntBASIC4.92□□□□□ -1.62
LMO4P61968 AC073592.7-201ENST00000623659 507 ntBASIC4.92□□□□□ -1.62
LMO4P61968 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
LMO4P61968 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LMO4P61968 CDY11P-201ENST00000447168 1651 ntBASIC4.92□□□□□ -1.62
LMO4P61968 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.92□□□□□ -1.62
LMO4P61968 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMO4P61968 CAST-202ENST00000325674 3356 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LMO4P61968 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 AL033543.1-201ENST00000623440 13454 ntBASIC4.91□□□□□ -1.62
LMO4P61968 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 RPL34P3-201ENST00000421454 338 ntBASIC4.91□□□□□ -1.62
LMO4P61968 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.91□□□□□ -1.62
LMO4P61968 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 AC079922.1-201ENST00000443291 359 ntBASIC4.91□□□□□ -1.62
LMO4P61968 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 YWHAEP1-201ENST00000453697 763 ntBASIC4.91□□□□□ -1.62
LMO4P61968 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC093719.1-201ENST00000480427 441 ntBASIC4.91□□□□□ -1.62
LMO4P61968 AC099521.1-201ENST00000482557 334 ntBASIC4.91□□□□□ -1.62
LMO4P61968 NENFP3-201ENST00000503735 313 ntBASIC4.91□□□□□ -1.62
LMO4P61968 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.91□□□□□ -1.62
LMO4P61968 CYP4F27P-201ENST00000514557 494 ntBASIC4.91□□□□□ -1.62
LMO4P61968 RNU4-18P-201ENST00000516751 149 ntBASIC4.91□□□□□ -1.62
LMO4P61968 RN7SKP98-201ENST00000517070 156 ntBASIC4.91□□□□□ -1.62
LMO4P61968 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LMO4P61968 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.91□□□□□ -1.62
LMO4P61968 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LMO4P61968 AC007494.1-201ENST00000562293 760 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms