Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RPS10P18-201ENST00000442662 495 ntBASIC5.96□□□□□ -1.46
AP1S1P61966 HLA-DPA3-207ENST00000454398 229 ntBASIC5.96□□□□□ -1.46
AP1S1P61966 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.96□□□□□ -1.46
AP1S1P61966 RNA5SP271-201ENST00000516700 88 ntBASIC5.96□□□□□ -1.46
AP1S1P61966 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.96□□□□□ -1.46
AP1S1P61966 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.96□□□□□ -1.46
AP1S1P61966 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 COX6CP7-201ENST00000597056 208 ntBASIC5.96□□□□□ -1.46
AP1S1P61966 AC125494.2-201ENST00000602431 657 ntBASIC5.96□□□□□ -1.46
AP1S1P61966 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.96□□□□□ -1.46
AP1S1P61966 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.96□□□□□ -1.46
AP1S1P61966 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP1S1P61966 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.95□□□□□ -1.46
AP1S1P61966 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 TMSB4XP2-201ENST00000335179 210 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 MIR1282-201ENST00000408865 101 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.95□□□□□ -1.46
AP1S1P61966 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 PCBP2P1-201ENST00000437262 977 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 RPS12P17-201ENST00000438591 377 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 NANOGNBP2-201ENST00000544753 553 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 AC006530.1-201ENST00000555980 571 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 AC091078.2-201ENST00000557145 559 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 MIR4420-201ENST00000583944 77 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.95□□□□□ -1.46
AP1S1P61966 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.95□□□□□ -1.46
AP1S1P61966 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.95□□□□□ -1.46
AP1S1P61966 SNX18P12-201ENST00000624821 759 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
AP1S1P61966 AC119674.1-217ENST00000641942 1086 ntBASIC5.95□□□□□ -1.46
AP1S1P61966 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.95□□□□□ -1.46
AP1S1P61966 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.95□□□□□ -1.46
AP1S1P61966 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.95□□□□□ -1.46
AP1S1P61966 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
AP1S1P61966 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
AP1S1P61966 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.94□□□□□ -1.46
AP1S1P61966 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
AP1S1P61966 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.94□□□□□ -1.46
AP1S1P61966 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 AC005225.5-201ENST00000623547 2225 ntBASIC5.94□□□□□ -1.46
AP1S1P61966 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 AC140479.2-201ENST00000421567 3130 ntBASIC5.94□□□□□ -1.46
AP1S1P61966 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.94□□□□□ -1.46
AP1S1P61966 KCTD9P1-201ENST00000430462 1167 ntBASIC5.94□□□□□ -1.46
AP1S1P61966 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.94□□□□□ -1.46
AP1S1P61966 DEFA9P-201ENST00000433042 285 ntBASIC5.94□□□□□ -1.46
AP1S1P61966 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AP1S1P61966 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.94□□□□□ -1.46
AP1S1P61966 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.94□□□□□ -1.46
AP1S1P61966 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.94□□□□□ -1.46
AP1S1P61966 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms