Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 SCARNA5-201ENST00000516201 276 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 AC136777.2-201ENST00000522979 358 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 AC073916.1-201ENST00000545095 130 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.89□□□□□ -1.47
RPS3AP61247 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.89□□□□□ -1.47
RPS3AP61247 MTND2P13-201ENST00000577438 1039 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPS3AP61247 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.89□□□□□ -1.47
RPS3AP61247 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.89□□□□□ -1.47
RPS3AP61247 AL133247.2-201ENST00000603236 482 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 BUB1P1-201ENST00000603541 607 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 AC073333.2-201ENST00000603589 769 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.89□□□□□ -1.47
RPS3AP61247 AL023583.1-201ENST00000607518 1143 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.89□□□□□ -1.47
RPS3AP61247 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.89□□□□□ -1.47
RPS3AP61247 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RPS3AP61247 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.89□□□□□ -1.47
RPS3AP61247 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RPS3AP61247 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RPS3AP61247 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPS3AP61247 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.89□□□□□ -1.47
RPS3AP61247 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RPS3AP61247 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 OR7A2P-201ENST00000304105 930 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 AL050335.1-201ENST00000396909 869 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 ADAM24P-201ENST00000398655 2101 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 CCNB2P1-201ENST00000399411 1150 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 RPL12P23-201ENST00000405880 490 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 RN7SKP161-201ENST00000411110 305 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.88□□□□□ -1.47
RPS3AP61247 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AC007563.3-201ENST00000433233 371 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AC046176.1-201ENST00000435260 1170 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 Z84478.1-201ENST00000438230 1219 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AL390879.1-201ENST00000439143 386 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 AL020997.1-201ENST00000446554 349 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.88□□□□□ -1.47
RPS3AP61247 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.88□□□□□ -1.47
RPS3AP61247 AL355032.1-201ENST00000472981 438 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.88□□□□□ -1.47
RPS3AP61247 IGHV1-14-201ENST00000523391 241 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.88□□□□□ -1.47
RPS3AP61247 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 AC138207.8-204ENST00000579588 527 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 AC068726.1-201ENST00000610993 341 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.88□□□□□ -1.47
RPS3AP61247 AP003499.2-201ENST00000624100 483 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 AC018692.2-201ENST00000624130 348 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 KYNUP3-201ENST00000574386 1341 ntBASIC5.88□□□□□ -1.47
RPS3AP61247 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
RPS3AP61247 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPS3AP61247 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RPS3AP61247 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.87□□□□□ -1.47
RPS3AP61247 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.87□□□□□ -1.47
RPS3AP61247 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPS3AP61247 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RPS3AP61247 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.87□□□□□ -1.47
RPS3AP61247 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RPS3AP61247 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.87□□□□□ -1.47
RPS3AP61247 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPS3AP61247 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms