Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 SNORD1C-201ENST00000363315 78 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 GAPDHP15-201ENST00000398586 975 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 MRPS21P5-201ENST00000417885 231 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 MARK2P12-201ENST00000420129 585 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC013470.3-201ENST00000420252 1194 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 PTP4A1P1-201ENST00000420539 515 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AHCYP8-201ENST00000425108 209 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 VN1R53P-201ENST00000429536 957 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 FECHP1-201ENST00000431896 1214 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC013410.1-201ENST00000436223 1232 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 KRT8P51-201ENST00000438938 274 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC008410.1-201ENST00000483777 339 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.21□□□□□ -1.74
CKS1BP61024 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.21□□□□□ -1.74
CKS1BP61024 ENPP7P3-201ENST00000509123 241 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.21□□□□□ -1.74
CKS1BP61024 EIF4A2P5-201ENST00000529914 499 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 OR4A40P-201ENST00000533878 948 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 SYPL1P2-201ENST00000582878 727 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC4.21□□□□□ -1.74
CKS1BP61024 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 AL133406.3-201ENST00000606817 541 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC006924.1-201ENST00000610750 559 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 MIR7159-201ENST00000620587 66 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 AC003992.1-201ENST00000635364 557 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 XKRY2-202ENST00000623874 1581 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 XKRY-202ENST00000624960 1581 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 AC245100.2-201ENST00000454544 1679 ntBASIC4.21□□□□□ -1.74
CKS1BP61024 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.21□□□□□ -1.74
CKS1BP61024 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.21□□□□□ -1.74
CKS1BP61024 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CKS1BP61024 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.21□□□□□ -1.74
CKS1BP61024 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CKS1BP61024 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CKS1BP61024 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.2□□□□□ -1.74
CKS1BP61024 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CKS1BP61024 KARSP1-201ENST00000451871 1752 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.2□□□□□ -1.74
CKS1BP61024 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.2□□□□□ -1.74
CKS1BP61024 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CKS1BP61024 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CKS1BP61024 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CKS1BP61024 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CKS1BP61024 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CKS1BP61024 RNA5SP382-201ENST00000363355 112 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 RNA5SP429-201ENST00000363688 109 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.2□□□□□ -1.74
CKS1BP61024 RN7SKP129-201ENST00000410288 299 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.2□□□□□ -1.74
CKS1BP61024 AL589794.1-201ENST00000424971 390 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CKS1BP61024 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 AL353803.3-201ENST00000444641 335 ntBASIC4.2□□□□□ -1.74
CKS1BP61024 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CKS1BP61024 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.2□□□□□ -1.74
CKS1BP61024 RN7SL352P-201ENST00000466002 277 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms