Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPS27P20-201ENST00000492051 246 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AC008629.2-201ENST00000503783 483 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 NACAP5-201ENST00000509863 636 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC111000.6-201ENST00000514471 709 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 CASP1P2-201ENST00000526830 1258 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 ZNF322P1-201ENST00000568013 1209 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 MRPS21P8-201ENST00000569196 235 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC012254.3-201ENST00000591183 2117 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 WBP1LP12-201ENST00000604449 331 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 MIR6823-201ENST00000622118 61 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 RBPJP7-201ENST00000442803 1447 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 RBPJP5-201ENST00000449433 1447 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 AL137058.3-201ENST00000624531 3099 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.72□□□□□ -1.49
PKNOX1P55347 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL035422.1-201ENST00000414193 397 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.72□□□□□ -1.49
PKNOX1P55347 RPS4XP5-201ENST00000419038 768 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC117434.1-201ENST00000419971 836 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 RPSAP65-201ENST00000429660 595 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 GAPDHP75-201ENST00000433910 943 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 RPL12P49-201ENST00000441100 121 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 RPS19P6-201ENST00000441327 433 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.72□□□□□ -1.49
PKNOX1P55347 PPIAP7-201ENST00000454070 489 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 RNU1-88P-201ENST00000459274 128 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC108751.3-201ENST00000461814 1020 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC006539.1-201ENST00000481419 501 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC005017.1-201ENST00000482002 490 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 RN7SL362P-201ENST00000494228 267 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.72□□□□□ -1.49
PKNOX1P55347 HMGN1P17-201ENST00000513734 295 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AP000620.1-201ENST00000527147 504 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.72□□□□□ -1.49
PKNOX1P55347 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 RN7SL230P-201ENST00000580835 303 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 LSM1P2-201ENST00000604911 322 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC092681.3-201ENST00000609463 678 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 FAM27E2-201ENST00000619668 403 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC096708.4-201ENST00000620563 552 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 AC022400.9-201ENST00000623633 273 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL161912.4-201ENST00000623889 2468 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 AL078595.2-201ENST00000605309 1780 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PKNOX1P55347 AC009962.1-201ENST00000567327 3813 ntBASIC5.72□□□□□ -1.49
PKNOX1P55347 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
PKNOX1P55347 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PKNOX1P55347 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PKNOX1P55347 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
PKNOX1P55347 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.49
PKNOX1P55347 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
PKNOX1P55347 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PKNOX1P55347 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
PKNOX1P55347 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms