Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TPM3P3-201ENST00000521343 354 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 AC074029.2-201ENST00000551045 634 ntBASIC5.67□□□□□ -1.5
CDH12P55289 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH12P55289 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 AC106785.3-201ENST00000564064 847 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 AC025283.1-201ENST00000572039 734 ntBASIC5.67□□□□□ -1.5
CDH12P55289 MIR212-201ENST00000586026 110 ntBASIC5.67□□□□□ -1.5
CDH12P55289 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 AL589765.6-201ENST00000601909 549 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 AL356752.1-201ENST00000615844 593 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC005899.7-201ENST00000618199 588 ntBASIC5.67□□□□□ -1.5
CDH12P55289 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 SAMMSON-210ENST00000641260 1308 ntBASIC5.67□□□□□ -1.5
CDH12P55289 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH12P55289 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 AC093297.3-201ENST00000607056 2517 ntBASIC5.67□□□□□ -1.5
CDH12P55289 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 DDX6P1-205ENST00000441966 1436 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 AC024587.1-201ENST00000505925 2157 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC092070.2-203ENST00000598377 3644 ntBASIC5.66□□□□□ -1.5
CDH12P55289 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 RNU1-49P-201ENST00000363468 159 ntBASIC5.66□□□□□ -1.5
CDH12P55289 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AL360013.1-201ENST00000419031 858 ntBASIC5.66□□□□□ -1.5
CDH12P55289 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH12P55289 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AK3P5-201ENST00000432033 519 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC112492.2-201ENST00000432774 1030 ntBASIC5.66□□□□□ -1.5
CDH12P55289 SOCS5P1-201ENST00000440415 949 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 OR2L9P-201ENST00000444456 913 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AL445991.1-201ENST00000450381 475 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AL162739.1-201ENST00000450606 307 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC128716.1-201ENST00000475129 166 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 OR4D12P-201ENST00000509361 911 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 NPM1P52-201ENST00000518264 846 ntBASIC5.66□□□□□ -1.5
CDH12P55289 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AP001858.2-201ENST00000536213 601 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC124891.1-201ENST00000536322 519 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH12P55289 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AL049779.3-201ENST00000557141 606 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AC107993.1-201ENST00000591343 684 ntBASIC5.66□□□□□ -1.5
CDH12P55289 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH12P55289 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH12P55289 AC211486.4-201ENST00000621495 113 ntBASIC5.66□□□□□ -1.5
CDH12P55289 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH12P55289 CUL4AP1-201ENST00000514750 1863 ntBASIC5.66□□□□□ -1.5
CDH12P55289 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH12P55289 AL133243.2-201ENST00000610331 1621 ntBASIC5.66□□□□□ -1.5
CDH12P55289 AC087565.3-202ENST00000642085 1603 ntBASIC5.66□□□□□ -1.5
CDH12P55289 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms