Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH6P55285 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH6P55285 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDH6P55285 AL078595.2-201ENST00000605309 1780 ntBASIC6.11□□□□□ -1.43
CDH6P55285 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AL162456.1-201ENST00000634535 2006 ntBASIC6.1□□□□□ -1.43
CDH6P55285 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDH6P55285 RNFT1P3-201ENST00000340898 1052 ntBASIC6.1□□□□□ -1.43
CDH6P55285 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.1□□□□□ -1.43
CDH6P55285 NPM1P38-201ENST00000403835 865 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.1□□□□□ -1.43
CDH6P55285 AC096775.1-201ENST00000437724 448 ntBASIC6.1□□□□□ -1.43
CDH6P55285 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AC023141.8-201ENST00000442554 208 ntBASIC6.1□□□□□ -1.43
CDH6P55285 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH6P55285 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 HMGN2P47-201ENST00000559378 272 ntBASIC6.1□□□□□ -1.43
CDH6P55285 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 MIR4271-201ENST00000582451 67 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AC005244.1-201ENST00000582566 339 ntBASIC6.1□□□□□ -1.43
CDH6P55285 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 AC145423.1-201ENST00000605712 336 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AL136131.3-201ENST00000607600 188 ntBASIC6.1□□□□□ -1.43
CDH6P55285 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH6P55285 MIR6809-201ENST00000612189 116 ntBASIC6.1□□□□□ -1.43
CDH6P55285 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.1□□□□□ -1.43
CDH6P55285 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
CDH6P55285 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.1□□□□□ -1.43
CDH6P55285 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CDH6P55285 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDH6P55285 AP002512.4-202ENST00000641599 4530 ntBASIC6.09□□□□□ -1.43
CDH6P55285 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDH6P55285 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 FBXL21-201ENST00000297158 1305 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AP004607.3-201ENST00000530354 3915 ntBASIC6.09□□□□□ -1.43
CDH6P55285 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CDH6P55285 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CDH6P55285 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH6P55285 AMYP1-201ENST00000440059 1023 ntBASIC6.09□□□□□ -1.43
CDH6P55285 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 FRG2FP-204ENST00000453982 852 ntBASIC6.09□□□□□ -1.43
CDH6P55285 GEMIN2P1-201ENST00000454246 752 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 RNU1-88P-201ENST00000459274 128 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AL157777.1-201ENST00000468100 304 ntBASIC6.09□□□□□ -1.43
CDH6P55285 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH6P55285 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.09□□□□□ -1.43
CDH6P55285 AC006539.1-201ENST00000481419 501 ntBASIC6.09□□□□□ -1.43
CDH6P55285 RN7SL741P-201ENST00000482473 289 ntBASIC6.09□□□□□ -1.43
CDH6P55285 RN7SL170P-201ENST00000487098 295 ntBASIC6.09□□□□□ -1.43
CDH6P55285 LDHAP1-201ENST00000509421 992 ntBASIC6.09□□□□□ -1.43
CDH6P55285 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH6P55285 AP003080.1-202ENST00000526526 915 ntBASIC6.09□□□□□ -1.43
CDH6P55285 GTF2IP11-201ENST00000526931 420 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CDH6P55285 AC007956.1-201ENST00000555623 542 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.09□□□□□ -1.43
CDH6P55285 CYCSP38-201ENST00000559840 322 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AC090826.1-203ENST00000569235 490 ntBASIC6.09□□□□□ -1.43
CDH6P55285 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AC023389.2-201ENST00000580031 955 ntBASIC6.09□□□□□ -1.43
CDH6P55285 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.09□□□□□ -1.43
CDH6P55285 AL133481.2-203ENST00000607558 139 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AC108673.3-201ENST00000609183 335 ntBASIC6.09□□□□□ -1.43
CDH6P55285 AL139099.4-201ENST00000614802 114 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms