Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 MIR585-201ENST00000384887 94 ntBASIC6.53□□□□□ -1.36
VCPP55072 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 RPL7P58-201ENST00000402913 758 ntBASIC6.53□□□□□ -1.36
VCPP55072 SPTLC1P2-201ENST00000407089 121 ntBASIC6.53□□□□□ -1.36
VCPP55072 OR3A2-201ENST00000408891 1076 ntBASIC6.53□□□□□ -1.36
VCPP55072 RPS7P14-201ENST00000426405 583 ntBASIC6.53□□□□□ -1.36
VCPP55072 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 IGLV3-4-201ENST00000432300 244 ntBASIC6.53□□□□□ -1.36
VCPP55072 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 AP006222.1-205ENST00000450734 457 ntBASIC6.53□□□□□ -1.36
VCPP55072 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 RN7SL643P-201ENST00000471845 291 ntBASIC6.53□□□□□ -1.36
VCPP55072 AC128716.1-201ENST00000475129 166 ntBASIC6.53□□□□□ -1.36
VCPP55072 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 RNA5SP34-201ENST00000516887 130 ntBASIC6.53□□□□□ -1.36
VCPP55072 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 AP003396.4-201ENST00000527574 265 ntBASIC6.53□□□□□ -1.36
VCPP55072 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 AC007494.1-201ENST00000562293 760 ntBASIC6.53□□□□□ -1.36
VCPP55072 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.53□□□□□ -1.36
VCPP55072 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.53□□□□□ -1.36
VCPP55072 SUMO2P15-201ENST00000604285 278 ntBASIC6.53□□□□□ -1.36
VCPP55072 AC022106.1-201ENST00000612834 766 ntBASIC6.53□□□□□ -1.36
VCPP55072 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.53□□□□□ -1.36
VCPP55072 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
VCPP55072 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
VCPP55072 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VCPP55072 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.52□□□□□ -1.36
VCPP55072 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
VCPP55072 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
VCPP55072 MIR433-201ENST00000384837 93 ntBASIC6.52□□□□□ -1.37
VCPP55072 SEPT7P2-202ENST00000398921 823 ntBASIC6.52□□□□□ -1.37
VCPP55072 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
VCPP55072 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.52□□□□□ -1.37
VCPP55072 SETP9-201ENST00000423837 832 ntBASIC6.52□□□□□ -1.37
VCPP55072 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.52□□□□□ -1.37
VCPP55072 PTMAP6-201ENST00000439110 327 ntBASIC6.52□□□□□ -1.37
VCPP55072 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 AC114728.1-201ENST00000488289 483 ntBASIC6.52□□□□□ -1.37
VCPP55072 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 IGHV4-55-201ENST00000520889 368 ntBASIC6.52□□□□□ -1.37
VCPP55072 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.52□□□□□ -1.37
VCPP55072 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.52□□□□□ -1.37
VCPP55072 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.52□□□□□ -1.37
VCPP55072 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 AC245014.3-201ENST00000618589 347 ntBASIC6.52□□□□□ -1.37
VCPP55072 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.52□□□□□ -1.37
VCPP55072 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.52□□□□□ -1.37
VCPP55072 AC008627.1-201ENST00000517511 1704 ntBASIC6.52□□□□□ -1.37
VCPP55072 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
VCPP55072 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.52□□□□□ -1.37
VCPP55072 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.51□□□□□ -1.37
VCPP55072 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 AC096921.2-201ENST00000561507 1916 ntBASIC6.51□□□□□ -1.37
VCPP55072 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VCPP55072 RNFT1P3-201ENST00000340898 1052 ntBASIC6.51□□□□□ -1.37
VCPP55072 RN7SKP160-201ENST00000363804 340 ntBASIC6.51□□□□□ -1.37
VCPP55072 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.51□□□□□ -1.37
VCPP55072 AC017078.1-201ENST00000416146 368 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms