Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 USP9YP26-201ENST00000421008 661 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 VN1R20P-201ENST00000425215 966 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AL035407.1-201ENST00000429211 571 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 MORF4L1P5-201ENST00000433352 961 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 RPSAP40-201ENST00000442343 891 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AC016772.1-201ENST00000444170 1261 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 RPL31P3-201ENST00000458430 332 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 TPT1P1-201ENST00000458495 518 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 AC021006.1-201ENST00000489849 553 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 RN7SL362P-201ENST00000494228 267 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 AC105185.1-201ENST00000518705 535 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AC010476.1-201ENST00000519111 851 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 OR10V3P-201ENST00000525712 725 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 OR7E10P-201ENST00000526420 991 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 BCAS2P1-201ENST00000528022 632 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 AP000919.1-202ENST00000581139 1264 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 MTATP6P3-201ENST00000581686 676 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 CCDC58P3-201ENST00000590792 430 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AL589863.1-201ENST00000595383 631 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 MIR6721-201ENST00000617181 87 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AL035461.2-201ENST00000619201 524 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AP001052.1-201ENST00000626421 99 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 AC111152.1-202ENST00000635848 339 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 OR7A1P-202ENST00000641542 1158 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 TMCC1P1-201ENST00000518897 1980 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
EPHB3P54753 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
EPHB3P54753 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 AC011379.1-201ENST00000508713 3025 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
EPHB3P54753 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 MTND4LP20-201ENST00000402379 270 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 RAD23BP2-201ENST00000416003 1207 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.92□□□□□ -1.3
EPHB3P54753 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.92□□□□□ -1.3
EPHB3P54753 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.92□□□□□ -1.3
EPHB3P54753 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 MTND2P19-201ENST00000449129 1012 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.92□□□□□ -1.3
EPHB3P54753 RN7SL552P-201ENST00000462094 276 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
EPHB3P54753 AC093663.2-201ENST00000484625 313 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 RPS3AP22-201ENST00000488297 769 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.92□□□□□ -1.3
EPHB3P54753 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.92□□□□□ -1.3
EPHB3P54753 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.92□□□□□ -1.3
EPHB3P54753 SCARNA5-201ENST00000516201 276 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AC103833.1-201ENST00000517442 172 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AC021733.2-201ENST00000518830 497 ntBASIC6.92□□□□□ -1.3
EPHB3P54753 AC011853.1-201ENST00000518911 454 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms