Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 CYCSP51-201ENST00000443545 318 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 PFN1P6-201ENST00000476786 399 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 RPL34P33-201ENST00000486062 334 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 CR383658.1-201ENST00000514609 734 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 RNA5SP434-201ENST00000516647 121 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC233702.7-202ENST00000582941 211 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AL356986.1-201ENST00000604085 341 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 QTRT1P1-201ENST00000604344 1078 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AP005431.1-201ENST00000618479 319 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AC021422.1-201ENST00000621212 473 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 AC002044.3-201ENST00000623314 541 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 AP003400.2-201ENST00000624036 666 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
LIMK1P53667 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
LIMK1P53667 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
LIMK1P53667 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 RNU1-150P-201ENST00000362491 162 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 RNU1-134P-201ENST00000362935 165 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 SNORA70H-201ENST00000383910 135 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 SNORA70J-201ENST00000384182 135 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK1P53667 SPTLC1P2-201ENST00000407089 121 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 NPM1P22-201ENST00000427761 952 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 BX119321.1-201ENST00000428912 797 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK1P53667 NDUFS5P5-201ENST00000437256 321 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC092865.4-201ENST00000477936 615 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK1P53667 CR383656.1-201ENST00000484916 377 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 EIF3LP3-201ENST00000495197 822 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC090958.1-201ENST00000511122 351 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 SNORD116-30-201ENST00000516468 85 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC004232.1-201ENST00000571388 208 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC010615.3-201ENST00000597319 394 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 AL157899.1-201ENST00000604110 936 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AL713998.2-201ENST00000604538 1198 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 AL356752.1-201ENST00000615844 593 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.17□□□□□ -1.42
LIMK1P53667 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
LIMK1P53667 AC245100.2-201ENST00000454544 1679 ntBASIC6.17□□□□□ -1.42
LIMK1P53667 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LIMK1P53667 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.17□□□□□ -1.42
LIMK1P53667 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.16□□□□□ -1.42
LIMK1P53667 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMK1P53667 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.16□□□□□ -1.42
LIMK1P53667 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMK1P53667 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms