Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.88□□□□□ -1.47
PDX1P52945 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
PDX1P52945 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDX1P52945 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 AL355377.1-201ENST00000621125 1653 ntBASIC5.88□□□□□ -1.47
PDX1P52945 OR13C1P-202ENST00000641378 2919 ntBASIC5.88□□□□□ -1.47
PDX1P52945 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.88□□□□□ -1.47
PDX1P52945 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PDX1P52945 MAPK10-270ENST00000641102 3538 ntBASIC5.87□□□□□ -1.47
PDX1P52945 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 OR11H13P-201ENST00000359695 979 ntBASIC5.87□□□□□ -1.47
PDX1P52945 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.87□□□□□ -1.47
PDX1P52945 AC245060.4-201ENST00000413293 1121 ntBASIC5.87□□□□□ -1.47
PDX1P52945 BX119904.3-201ENST00000428194 957 ntBASIC5.87□□□□□ -1.47
PDX1P52945 NPM1P25-201ENST00000429734 854 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.87□□□□□ -1.47
PDX1P52945 AC064862.4-201ENST00000442180 334 ntBASIC5.87□□□□□ -1.47
PDX1P52945 TRIM60P16-201ENST00000444048 694 ntBASIC5.87□□□□□ -1.47
PDX1P52945 RPL36AP39-201ENST00000445859 318 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.87□□□□□ -1.47
PDX1P52945 ZNF619P1-201ENST00000446539 752 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL022237.1-201ENST00000446663 358 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL445466.1-201ENST00000448432 357 ntBASIC5.87□□□□□ -1.47
PDX1P52945 GEMIN2P1-201ENST00000454246 752 ntBASIC5.87□□□□□ -1.47
PDX1P52945 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.87□□□□□ -1.47
PDX1P52945 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 SETP21-201ENST00000514799 892 ntBASIC5.87□□□□□ -1.47
PDX1P52945 SNORA48.9-201ENST00000516419 162 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC027308.1-201ENST00000517993 110 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC025857.1-201ENST00000525252 377 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AP000648.1-201ENST00000529682 397 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC079600.1-201ENST00000550326 297 ntBASIC5.87□□□□□ -1.47
PDX1P52945 EIF1AXP2-201ENST00000555940 413 ntBASIC5.87□□□□□ -1.47
PDX1P52945 OR4H6P-201ENST00000563771 921 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 NPM1P45-201ENST00000583151 559 ntBASIC5.87□□□□□ -1.47
PDX1P52945 COX6CP7-201ENST00000597056 208 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 AC087468.1-201ENST00000604365 630 ntBASIC5.87□□□□□ -1.47
PDX1P52945 RPL12P48-201ENST00000605620 304 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL031601.1-201ENST00000605702 394 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AL645933.2-201ENST00000606743 1207 ntBASIC5.87□□□□□ -1.47
PDX1P52945 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 AL352984.2-201ENST00000611153 546 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC004477.3-201ENST00000614061 590 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AF117829.2-201ENST00000619538 361 ntBASIC5.87□□□□□ -1.47
PDX1P52945 AC132825.8-201ENST00000640783 297 ntBASIC5.87□□□□□ -1.47
PDX1P52945 OR7A1P-202ENST00000641542 1158 ntBASIC5.87□□□□□ -1.47
PDX1P52945 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 Z95114.1-201ENST00000624264 14574 ntBASIC5.87□□□□□ -1.47
PDX1P52945 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDX1P52945 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.87□□□□□ -1.47
PDX1P52945 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PDX1P52945 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 AC034229.2-201ENST00000566945 2508 ntBASIC5.86□□□□□ -1.47
PDX1P52945 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 AP000641.1-201ENST00000531988 1639 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AL353763.1-201ENST00000624467 1628 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC130360.2-201ENST00000533477 1556 ntBASIC5.86□□□□□ -1.47
PDX1P52945 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.86□□□□□ -1.47
PDX1P52945 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 AC016908.1-201ENST00000442571 1219 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.86□□□□□ -1.47
PDX1P52945 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.86□□□□□ -1.47
PDX1P52945 AL445665.1-202ENST00000452436 324 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 RPS27AP2-201ENST00000457576 465 ntBASIC5.86□□□□□ -1.47
PDX1P52945 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.86□□□□□ -1.47
PDX1P52945 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.86□□□□□ -1.47
PDX1P52945 RN7SL269P-201ENST00000467795 305 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.86□□□□□ -1.47
PDX1P52945 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 RNA5SP362-201ENST00000516048 118 ntBASIC5.86□□□□□ -1.47
PDX1P52945 RNA5SP116-201ENST00000516132 98 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.86□□□□□ -1.47
PDX1P52945 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms