Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 RPL5P14-201ENST00000494197 878 ntBASIC6.57□□□□□ -1.36
NEK3P51956 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC018645.1-201ENST00000505003 109 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.57□□□□□ -1.36
NEK3P51956 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 AC024405.1-201ENST00000532521 1042 ntBASIC6.57□□□□□ -1.36
NEK3P51956 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 AC009729.1-201ENST00000548873 1133 ntBASIC6.57□□□□□ -1.36
NEK3P51956 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 AL512310.9-201ENST00000553311 948 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AL121579.2-201ENST00000555466 590 ntBASIC6.57□□□□□ -1.36
NEK3P51956 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.57□□□□□ -1.36
NEK3P51956 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.57□□□□□ -1.36
NEK3P51956 AC010325.3-201ENST00000641084 394 ntBASIC6.57□□□□□ -1.36
NEK3P51956 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.57□□□□□ -1.36
NEK3P51956 MSL3P1-202ENST00000440028 1468 ntBASIC6.57□□□□□ -1.36
NEK3P51956 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 AL121950.1-201ENST00000624993 2077 ntBASIC6.57□□□□□ -1.36
NEK3P51956 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
NEK3P51956 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NEK3P51956 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.57□□□□□ -1.36
NEK3P51956 MT-RNR2-201ENST00000387347 1559 ntBASIC6.57□□□□□ -1.36
NEK3P51956 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NEK3P51956 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.56□□□□□ -1.36
NEK3P51956 NPM1P37-201ENST00000403105 874 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.56□□□□□ -1.36
NEK3P51956 RPL24P2-201ENST00000421023 475 ntBASIC6.56□□□□□ -1.36
NEK3P51956 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 UBE2V1P6-201ENST00000430840 422 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 MTCYBP12-201ENST00000440559 1134 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC009963.4-201ENST00000448535 339 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.56□□□□□ -1.36
NEK3P51956 RN7SL168P-201ENST00000463821 279 ntBASIC6.56□□□□□ -1.36
NEK3P51956 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 HAUS1P1-201ENST00000505275 832 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 RN7SKP248-201ENST00000516278 305 ntBASIC6.56□□□□□ -1.36
NEK3P51956 SNORA74.1-201ENST00000516320 180 ntBASIC6.56□□□□□ -1.36
NEK3P51956 IGHV3-63-201ENST00000518422 341 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.56□□□□□ -1.36
NEK3P51956 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 AC023310.2-201ENST00000553844 547 ntBASIC6.56□□□□□ -1.36
NEK3P51956 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AC107958.1-201ENST00000556576 290 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.56□□□□□ -1.36
NEK3P51956 AC026898.1-201ENST00000586404 571 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 AC253576.2-201ENST00000618815 580 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AL122023.1-201ENST00000622847 530 ntBASIC6.56□□□□□ -1.36
NEK3P51956 AC097460.3-201ENST00000623099 442 ntBASIC6.56□□□□□ -1.36
NEK3P51956 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
NEK3P51956 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NEK3P51956 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.56□□□□□ -1.36
NEK3P51956 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NEK3P51956 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NEK3P51956 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NEK3P51956 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.55□□□□□ -1.36
NEK3P51956 ZNF90P1-201ENST00000480493 1951 ntBASIC6.55□□□□□ -1.36
NEK3P51956 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms