Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.61□□□□□ -1.35
GPC3P51654 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.61□□□□□ -1.35
GPC3P51654 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
GPC3P51654 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 AP001804.1-201ENST00000526868 919 ntBASIC6.61□□□□□ -1.35
GPC3P51654 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 PCNAP4-201ENST00000532690 730 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.61□□□□□ -1.35
GPC3P51654 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.61□□□□□ -1.35
GPC3P51654 AC007494.1-201ENST00000562293 760 ntBASIC6.61□□□□□ -1.35
GPC3P51654 ZNF322P1-201ENST00000568013 1209 ntBASIC6.61□□□□□ -1.35
GPC3P51654 COX6CP7-201ENST00000597056 208 ntBASIC6.61□□□□□ -1.35
GPC3P51654 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 AC004890.3-201ENST00000605566 1095 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AP005431.1-201ENST00000618479 319 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AC127024.6-201ENST00000621598 424 ntBASIC6.61□□□□□ -1.35
GPC3P51654 SNORA17.5-201ENST00000630429 132 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AL121768.1-201ENST00000613917 2544 ntBASIC6.61□□□□□ -1.35
GPC3P51654 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.61□□□□□ -1.35
GPC3P51654 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
GPC3P51654 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
GPC3P51654 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GPC3P51654 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.6□□□□□ -1.35
GPC3P51654 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.6□□□□□ -1.35
GPC3P51654 AL451142.1-201ENST00000375867 775 ntBASIC6.6□□□□□ -1.35
GPC3P51654 OR2W4P-201ENST00000406496 926 ntBASIC6.6□□□□□ -1.35
GPC3P51654 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.6□□□□□ -1.35
GPC3P51654 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.6□□□□□ -1.35
GPC3P51654 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.6□□□□□ -1.35
GPC3P51654 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.6□□□□□ -1.35
GPC3P51654 OR2AF1P-201ENST00000454899 889 ntBASIC6.6□□□□□ -1.35
GPC3P51654 NXT1P1-201ENST00000458481 316 ntBASIC6.6□□□□□ -1.35
GPC3P51654 RN7SL352P-201ENST00000466002 277 ntBASIC6.6□□□□□ -1.35
GPC3P51654 SLC25A51P1-201ENST00000468432 871 ntBASIC6.6□□□□□ -1.35
GPC3P51654 AL355032.1-201ENST00000472981 438 ntBASIC6.6□□□□□ -1.35
GPC3P51654 RN7SL101P-201ENST00000496350 279 ntBASIC6.6□□□□□ -1.35
GPC3P51654 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.6□□□□□ -1.35
GPC3P51654 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.6□□□□□ -1.35
GPC3P51654 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.6□□□□□ -1.35
GPC3P51654 AL356801.1-201ENST00000559320 294 ntBASIC6.6□□□□□ -1.35
GPC3P51654 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.6□□□□□ -1.35
GPC3P51654 AL357153.4-201ENST00000620487 1016 ntBASIC6.6□□□□□ -1.35
GPC3P51654 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.6□□□□□ -1.35
GPC3P51654 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.6□□□□□ -1.35
GPC3P51654 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.6□□□□□ -1.35
GPC3P51654 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.6□□□□□ -1.35
GPC3P51654 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
GPC3P51654 RNF19BPY-201ENST00000458209 1550 ntBASIC6.6□□□□□ -1.35
GPC3P51654 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GPC3P51654 AC005225.5-201ENST00000623547 2225 ntBASIC6.6□□□□□ -1.35
GPC3P51654 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GPC3P51654 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GPC3P51654 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GPC3P51654 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
GPC3P51654 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GPC3P51654 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GPC3P51654 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.59□□□□□ -1.35
GPC3P51654 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.59□□□□□ -1.35
GPC3P51654 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GPC3P51654 RN7SKP128-201ENST00000364270 303 ntBASIC6.59□□□□□ -1.35
GPC3P51654 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
GPC3P51654 AL121835.1-201ENST00000404250 354 ntBASIC6.59□□□□□ -1.35
GPC3P51654 AL512422.1-201ENST00000407033 553 ntBASIC6.59□□□□□ -1.35
GPC3P51654 AC245060.4-201ENST00000413293 1121 ntBASIC6.59□□□□□ -1.35
GPC3P51654 EEF1B2P8-201ENST00000414101 671 ntBASIC6.59□□□□□ -1.35
GPC3P51654 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.59□□□□□ -1.35
GPC3P51654 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.59□□□□□ -1.35
GPC3P51654 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.59□□□□□ -1.35
GPC3P51654 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.59□□□□□ -1.35
GPC3P51654 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.59□□□□□ -1.35
GPC3P51654 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.59□□□□□ -1.35
GPC3P51654 RN7SKP248-201ENST00000516278 305 ntBASIC6.59□□□□□ -1.35
GPC3P51654 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.59□□□□□ -1.35
GPC3P51654 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.59□□□□□ -1.35
GPC3P51654 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.59□□□□□ -1.35
GPC3P51654 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.59□□□□□ -1.35
GPC3P51654 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.59□□□□□ -1.35
GPC3P51654 RPL12P48-201ENST00000605620 304 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms