Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC130304.1-201ENST00000622942 2385 ntBASIC6.27□□□□□ -1.41
LHX1P48742 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 RNA5SP500-201ENST00000364486 119 ntBASIC6.27□□□□□ -1.41
LHX1P48742 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LHX1P48742 RNA5SP284-201ENST00000384547 118 ntBASIC6.27□□□□□ -1.41
LHX1P48742 AK4P4-201ENST00000419465 646 ntBASIC6.27□□□□□ -1.41
LHX1P48742 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.27□□□□□ -1.41
LHX1P48742 RPL5P16-201ENST00000471467 790 ntBASIC6.27□□□□□ -1.41
LHX1P48742 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.27□□□□□ -1.41
LHX1P48742 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.27□□□□□ -1.41
LHX1P48742 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.27□□□□□ -1.41
LHX1P48742 GARSP1-201ENST00000570895 719 ntBASIC6.27□□□□□ -1.41
LHX1P48742 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 AC008521.2-201ENST00000591021 259 ntBASIC6.27□□□□□ -1.41
LHX1P48742 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.27□□□□□ -1.41
LHX1P48742 AL355974.3-201ENST00000617383 467 ntBASIC6.27□□□□□ -1.41
LHX1P48742 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.27□□□□□ -1.41
LHX1P48742 AL137141.1-201ENST00000624622 4836 ntBASIC6.27□□□□□ -1.41
LHX1P48742 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.26□□□□□ -1.41
LHX1P48742 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 AL449283.1-201ENST00000602631 3403 ntBASIC6.26□□□□□ -1.41
LHX1P48742 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LHX1P48742 MIR375-201ENST00000362103 64 ntBASIC6.26□□□□□ -1.41
LHX1P48742 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.26□□□□□ -1.41
LHX1P48742 NFYAP1-201ENST00000431953 972 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.26□□□□□ -1.41
LHX1P48742 RPS12P17-201ENST00000438591 377 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AC023141.8-201ENST00000442554 208 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.26□□□□□ -1.41
LHX1P48742 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.26□□□□□ -1.41
LHX1P48742 AL358876.1-201ENST00000453364 1075 ntBASIC6.26□□□□□ -1.41
LHX1P48742 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 AC091917.2-201ENST00000505002 744 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.26□□□□□ -1.41
LHX1P48742 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
LHX1P48742 SNORA70.20-201ENST00000516848 126 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.26□□□□□ -1.41
LHX1P48742 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.26□□□□□ -1.41
LHX1P48742 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.26□□□□□ -1.41
LHX1P48742 AC007346.2-201ENST00000564816 892 ntBASIC6.26□□□□□ -1.41
LHX1P48742 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.26□□□□□ -1.41
LHX1P48742 MIR3614-201ENST00000581261 86 ntBASIC6.26□□□□□ -1.41
LHX1P48742 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.26□□□□□ -1.41
LHX1P48742 AC026124.2-201ENST00000621847 656 ntBASIC6.26□□□□□ -1.41
LHX1P48742 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
LHX1P48742 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 AC011504.1-201ENST00000623331 4103 ntBASIC6.26□□□□□ -1.41
LHX1P48742 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LHX1P48742 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LHX1P48742 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LHX1P48742 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 AC015689.2-201ENST00000528172 1738 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AC078880.4-201ENST00000617627 1749 ntBASIC6.25□□□□□ -1.41
LHX1P48742 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AL031985.1-201ENST00000392713 418 ntBASIC6.25□□□□□ -1.41
LHX1P48742 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
LHX1P48742 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.25□□□□□ -1.41
LHX1P48742 RNA5SP251-201ENST00000410614 137 ntBASIC6.25□□□□□ -1.41
LHX1P48742 RN7SKP29-201ENST00000410957 272 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.25□□□□□ -1.41
LHX1P48742 MTND6P12-201ENST00000428247 522 ntBASIC6.25□□□□□ -1.41
LHX1P48742 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.25□□□□□ -1.41
LHX1P48742 RPL31P15-201ENST00000449770 338 ntBASIC6.25□□□□□ -1.41
LHX1P48742 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms