Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDX1P47902 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.14□□□□□ -1.59
CDX1P47902 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CDX1P47902 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.14□□□□□ -1.59
CDX1P47902 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 AC079753.1-201ENST00000623243 3868 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDX1P47902 OR7A2P-201ENST00000304105 930 ntBASIC5.13□□□□□ -1.59
CDX1P47902 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 SNORA5.1-201ENST00000384275 131 ntBASIC5.13□□□□□ -1.59
CDX1P47902 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDX1P47902 OR1F12-201ENST00000402365 945 ntBASIC5.13□□□□□ -1.59
CDX1P47902 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.13□□□□□ -1.59
CDX1P47902 AC099535.1-201ENST00000408928 371 ntBASIC5.13□□□□□ -1.59
CDX1P47902 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 MTCYBP7-201ENST00000419540 1134 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 AL139415.1-201ENST00000424862 352 ntBASIC5.13□□□□□ -1.59
CDX1P47902 CR848007.2-201ENST00000424918 787 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AL365220.1-201ENST00000432923 399 ntBASIC5.13□□□□□ -1.59
CDX1P47902 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.13□□□□□ -1.59
CDX1P47902 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 AP002345.1-201ENST00000456493 928 ntBASIC5.13□□□□□ -1.59
CDX1P47902 EIF2S2P4-201ENST00000461070 984 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 AC124891.1-201ENST00000536322 519 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 RPL3P13-201ENST00000550415 216 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 MT1CP-201ENST00000567054 174 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC025283.1-201ENST00000572039 734 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.13□□□□□ -1.59
CDX1P47902 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 AC019257.2-201ENST00000605539 497 ntBASIC5.13□□□□□ -1.59
CDX1P47902 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AC015802.5-201ENST00000607478 399 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AL589743.6-201ENST00000611025 117 ntBASIC5.13□□□□□ -1.59
CDX1P47902 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC005277.2-201ENST00000617898 390 ntBASIC5.13□□□□□ -1.59
CDX1P47902 AC074276.2-201ENST00000619891 348 ntBASIC5.13□□□□□ -1.59
CDX1P47902 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.13□□□□□ -1.59
CDX1P47902 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDX1P47902 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.13□□□□□ -1.59
CDX1P47902 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.13□□□□□ -1.59
CDX1P47902 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.12□□□□□ -1.59
CDX1P47902 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDX1P47902 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDX1P47902 SNORA64.3-201ENST00000365647 134 ntBASIC5.12□□□□□ -1.59
CDX1P47902 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDX1P47902 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.12□□□□□ -1.59
CDX1P47902 U3.52-201ENST00000384034 216 ntBASIC5.12□□□□□ -1.59
CDX1P47902 AL391419.1-201ENST00000398901 1275 ntBASIC5.12□□□□□ -1.59
CDX1P47902 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.12□□□□□ -1.59
CDX1P47902 RPL12P23-201ENST00000405880 490 ntBASIC5.12□□□□□ -1.59
CDX1P47902 GABARAPL3-201ENST00000412799 354 ntBASIC5.12□□□□□ -1.59
CDX1P47902 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.12□□□□□ -1.59
CDX1P47902 MRPS21P5-201ENST00000417885 231 ntBASIC5.12□□□□□ -1.59
CDX1P47902 AL360013.1-201ENST00000419031 858 ntBASIC5.12□□□□□ -1.59
CDX1P47902 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.12□□□□□ -1.59
CDX1P47902 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.12□□□□□ -1.59
CDX1P47902 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.12□□□□□ -1.59
CDX1P47902 RPL12P18-201ENST00000437175 325 ntBASIC5.12□□□□□ -1.59
CDX1P47902 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.12□□□□□ -1.59
CDX1P47902 AC234771.2-201ENST00000445718 597 ntBASIC5.12□□□□□ -1.59
CDX1P47902 CCNJP1-201ENST00000450600 1149 ntBASIC5.12□□□□□ -1.59
CDX1P47902 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.12□□□□□ -1.59
CDX1P47902 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CDX1P47902 AC131392.1-201ENST00000506490 633 ntBASIC5.12□□□□□ -1.59
CDX1P47902 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.12□□□□□ -1.59
CDX1P47902 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.12□□□□□ -1.59
CDX1P47902 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms