Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 TPM3P3-201ENST00000521343 354 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-1P43699 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-1P43699 TPRX1P1-201ENST00000557620 319 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-1P43699 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 MTND2P13-201ENST00000577438 1039 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 RN7SL657P-201ENST00000582431 293 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC040174.2-201ENST00000602701 465 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AL133247.2-201ENST00000603236 482 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC073333.2-201ENST00000603589 769 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 OR8G7P-201ENST00000616658 848 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AP003108.4-201ENST00000623917 878 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AP003499.2-201ENST00000624100 483 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 LINC02495-203ENST00000636704 242 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 RPL31P11-201ENST00000426558 1558 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC022306.1-201ENST00000560489 1562 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC004076.2-201ENST00000620532 3323 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-1P43699 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC092451.3-201ENST00000625067 1343 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NKX2-1P43699 RNA5SP453-201ENST00000362503 119 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 SNORD35A-201ENST00000363389 86 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 RN7SKP128-201ENST00000364270 303 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 RN7SKP186-201ENST00000365371 303 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 MIR421-201ENST00000365696 85 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 U3.52-201ENST00000384034 216 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 RPL10P10-201ENST00000403509 664 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC013403.1-201ENST00000436954 263 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AL161722.1-201ENST00000446972 1032 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC015864.1-201ENST00000496512 544 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 PSMA2P2-201ENST00000504319 686 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC073648.3-201ENST00000504939 925 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 HMGB1P47-201ENST00000511281 589 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC016550.3-201ENST00000515706 767 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 MTND1P36-201ENST00000522384 936 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC244502.2-201ENST00000543361 851 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 CR383656.14-201ENST00000551951 406 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC023968.1-201ENST00000560719 475 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC092718.4-201ENST00000566639 716 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 RN7SL131P-201ENST00000579043 256 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 SNORD39.2-201ENST00000579995 76 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-1P43699 DYNLL1P1-201ENST00000595442 269 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC125494.2-201ENST00000602431 657 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC092474.3-201ENST00000603022 568 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 MIR8082-201ENST00000612488 81 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-1P43699 AC027506.1-201ENST00000621395 198 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AC117503.3-201ENST00000623811 601 ntBASIC5.01□□□□□ -1.61
NKX2-1P43699 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms