Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX3P41225 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.62□□□□□ -1.51
SOX3P41225 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX3P41225 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.62□□□□□ -1.51
SOX3P41225 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX3P41225 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.62□□□□□ -1.51
SOX3P41225 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.62□□□□□ -1.51
SOX3P41225 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.62□□□□□ -1.51
SOX3P41225 AL360012.1-201ENST00000602813 131 ntBASIC5.62□□□□□ -1.51
SOX3P41225 AL645933.2-201ENST00000606743 1207 ntBASIC5.62□□□□□ -1.51
SOX3P41225 AC024884.1-201ENST00000620583 399 ntBASIC5.62□□□□□ -1.51
SOX3P41225 AC022400.9-201ENST00000623633 273 ntBASIC5.62□□□□□ -1.51
SOX3P41225 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX3P41225 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.62□□□□□ -1.51
SOX3P41225 KYNUP3-201ENST00000574386 1341 ntBASIC5.62□□□□□ -1.51
SOX3P41225 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SOX3P41225 AC007342.9-201ENST00000623877 1385 ntBASIC5.62□□□□□ -1.51
SOX3P41225 PSG10P-201ENST00000501199 1500 ntBASIC5.62□□□□□ -1.51
SOX3P41225 CASC19-238ENST00000641523 1558 ntBASIC5.62□□□□□ -1.51
SOX3P41225 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX3P41225 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SOX3P41225 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.62□□□□□ -1.51
SOX3P41225 DNM1P47-203ENST00000571780 12667 ntBASIC5.62□□□□□ -1.51
SOX3P41225 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
SOX3P41225 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SOX3P41225 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX3P41225 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.61□□□□□ -1.51
SOX3P41225 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX3P41225 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 RPL12P12-201ENST00000424633 501 ntBASIC5.61□□□□□ -1.51
SOX3P41225 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.61□□□□□ -1.51
SOX3P41225 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 AL512593.1-201ENST00000444758 779 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 OR7L1P-201ENST00000456181 380 ntBASIC5.61□□□□□ -1.51
SOX3P41225 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 CST12P-201ENST00000457644 362 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC114876.1-201ENST00000490962 1366 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX3P41225 AC025458.1-201ENST00000506046 166 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 AC025470.1-201ENST00000510053 2032 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.61□□□□□ -1.51
SOX3P41225 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX3P41225 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 AP003396.4-201ENST00000527574 265 ntBASIC5.61□□□□□ -1.51
SOX3P41225 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 AC007956.1-201ENST00000555623 542 ntBASIC5.61□□□□□ -1.51
SOX3P41225 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 RPA2P1-201ENST00000556557 721 ntBASIC5.61□□□□□ -1.51
SOX3P41225 LINC00556-201ENST00000569603 412 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 AC020916.2-201ENST00000591242 360 ntBASIC5.61□□□□□ -1.51
SOX3P41225 MIR132-201ENST00000591554 101 ntBASIC5.61□□□□□ -1.51
SOX3P41225 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
SOX3P41225 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.61□□□□□ -1.51
SOX3P41225 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX3P41225 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.61□□□□□ -1.51
SOX3P41225 NF1P10-201ENST00000613227 742 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC245014.3-201ENST00000618589 347 ntBASIC5.61□□□□□ -1.51
SOX3P41225 AC096708.4-201ENST00000620563 552 ntBASIC5.61□□□□□ -1.51
SOX3P41225 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SOX3P41225 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
SOX3P41225 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 AL449283.1-201ENST00000602631 3403 ntBASIC5.61□□□□□ -1.51
SOX3P41225 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX3P41225 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX3P41225 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX3P41225 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SOX3P41225 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX3P41225 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX3P41225 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX3P41225 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX3P41225 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.6□□□□□ -1.51
SOX3P41225 RPS15AP30-201ENST00000420976 390 ntBASIC5.6□□□□□ -1.51
SOX3P41225 AC066692.1-201ENST00000421721 457 ntBASIC5.6□□□□□ -1.51
SOX3P41225 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX3P41225 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX3P41225 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX3P41225 UBE2V2P1-201ENST00000434717 398 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms