Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.73□□□□□ -1.33
CIITAP33076 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.73□□□□□ -1.33
CIITAP33076 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CIITAP33076 HLA-DPA3-207ENST00000454398 229 ntBASIC6.73□□□□□ -1.33
CIITAP33076 RWDD4P1-201ENST00000488019 565 ntBASIC6.73□□□□□ -1.33
CIITAP33076 OR52A4P-203ENST00000498233 1014 ntBASIC6.73□□□□□ -1.33
CIITAP33076 PCNAP4-201ENST00000532690 730 ntBASIC6.73□□□□□ -1.33
CIITAP33076 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.73□□□□□ -1.33
CIITAP33076 AC091078.2-201ENST00000557145 559 ntBASIC6.73□□□□□ -1.33
CIITAP33076 AC145423.1-201ENST00000605712 336 ntBASIC6.73□□□□□ -1.33
CIITAP33076 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.73□□□□□ -1.33
CIITAP33076 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 AC130304.1-201ENST00000622942 2385 ntBASIC6.73□□□□□ -1.33
CIITAP33076 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CIITAP33076 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.73□□□□□ -1.33
CIITAP33076 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CIITAP33076 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 RNA5SP500-201ENST00000364486 119 ntBASIC6.72□□□□□ -1.33
CIITAP33076 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 HMGN1P20-201ENST00000411849 300 ntBASIC6.72□□□□□ -1.33
CIITAP33076 AC002069.1-201ENST00000429649 1159 ntBASIC6.72□□□□□ -1.33
CIITAP33076 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 NFYAP1-201ENST00000431953 972 ntBASIC6.72□□□□□ -1.33
CIITAP33076 GAPDHP34-201ENST00000432112 823 ntBASIC6.72□□□□□ -1.33
CIITAP33076 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.72□□□□□ -1.33
CIITAP33076 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 AC084754.1-201ENST00000463466 464 ntBASIC6.72□□□□□ -1.33
CIITAP33076 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.72□□□□□ -1.33
CIITAP33076 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.72□□□□□ -1.33
CIITAP33076 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 AC006530.1-201ENST00000555980 571 ntBASIC6.72□□□□□ -1.33
CIITAP33076 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 AC027243.2-201ENST00000602530 724 ntBASIC6.72□□□□□ -1.33
CIITAP33076 AC092953.2-201ENST00000608000 699 ntBASIC6.72□□□□□ -1.33
CIITAP33076 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 AC016911.1-201ENST00000613297 452 ntBASIC6.72□□□□□ -1.33
CIITAP33076 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CIITAP33076 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.72□□□□□ -1.33
CIITAP33076 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CIITAP33076 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CIITAP33076 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CIITAP33076 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.71□□□□□ -1.33
CIITAP33076 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.71□□□□□ -1.33
CIITAP33076 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.71□□□□□ -1.33
CIITAP33076 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
CIITAP33076 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
CIITAP33076 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CIITAP33076 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CIITAP33076 USP9YP19-201ENST00000412165 485 ntBASIC6.71□□□□□ -1.34
CIITAP33076 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.71□□□□□ -1.34
CIITAP33076 FAM204CP-201ENST00000424489 642 ntBASIC6.71□□□□□ -1.34
CIITAP33076 AC244033.1-201ENST00000426826 870 ntBASIC6.71□□□□□ -1.34
CIITAP33076 KCTD9P1-201ENST00000430462 1167 ntBASIC6.71□□□□□ -1.34
CIITAP33076 PCBP2P1-201ENST00000437262 977 ntBASIC6.71□□□□□ -1.34
CIITAP33076 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.71□□□□□ -1.34
CIITAP33076 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms