Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.59□□□□□ -1.35
BDNFP23560 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.59□□□□□ -1.35
BDNFP23560 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 RNA5SP333-201ENST00000363466 118 ntBASIC6.59□□□□□ -1.35
BDNFP23560 RNA5SP334-201ENST00000364825 118 ntBASIC6.59□□□□□ -1.35
BDNFP23560 SNORA77.2-201ENST00000408571 112 ntBASIC6.59□□□□□ -1.35
BDNFP23560 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 MTCYBP7-201ENST00000419540 1134 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC007064.3-201ENST00000422608 359 ntBASIC6.59□□□□□ -1.35
BDNFP23560 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.59□□□□□ -1.35
BDNFP23560 MTCO1P45-201ENST00000431457 267 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.59□□□□□ -1.35
BDNFP23560 CFL1P4-201ENST00000451536 498 ntBASIC6.59□□□□□ -1.35
BDNFP23560 PPIAP7-201ENST00000454070 489 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC069277.2-201ENST00000454211 432 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC009963.3-201ENST00000458090 486 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.59□□□□□ -1.35
BDNFP23560 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 AP000620.1-201ENST00000527147 504 ntBASIC6.59□□□□□ -1.35
BDNFP23560 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 AC092865.1-201ENST00000544395 1023 ntBASIC6.59□□□□□ -1.35
BDNFP23560 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.59□□□□□ -1.35
BDNFP23560 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.59□□□□□ -1.35
BDNFP23560 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.59□□□□□ -1.35
BDNFP23560 SNX6P1-201ENST00000601728 1224 ntBASIC6.59□□□□□ -1.35
BDNFP23560 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.59□□□□□ -1.35
BDNFP23560 AC073333.2-201ENST00000603589 769 ntBASIC6.59□□□□□ -1.35
BDNFP23560 BNIP3P7-201ENST00000605641 516 ntBASIC6.59□□□□□ -1.35
BDNFP23560 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 AL445649.1-201ENST00000615941 691 ntBASIC6.59□□□□□ -1.35
BDNFP23560 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.59□□□□□ -1.35
BDNFP23560 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 AF287957.1-201ENST00000607368 1595 ntBASIC6.59□□□□□ -1.35
BDNFP23560 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
BDNFP23560 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
BDNFP23560 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
BDNFP23560 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
BDNFP23560 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
BDNFP23560 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
BDNFP23560 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
BDNFP23560 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.36
BDNFP23560 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
BDNFP23560 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
BDNFP23560 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.58□□□□□ -1.36
BDNFP23560 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.58□□□□□ -1.36
BDNFP23560 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.58□□□□□ -1.36
BDNFP23560 CYP4F30P-202ENST00000420048 405 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.58□□□□□ -1.36
BDNFP23560 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.58□□□□□ -1.36
BDNFP23560 AL451136.1-201ENST00000435399 325 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AC023141.3-201ENST00000436698 278 ntBASIC6.58□□□□□ -1.36
BDNFP23560 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AL157884.3-201ENST00000448273 1184 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AL133244.1-201ENST00000456007 258 ntBASIC6.58□□□□□ -1.36
BDNFP23560 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.58□□□□□ -1.36
BDNFP23560 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.58□□□□□ -1.36
BDNFP23560 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.58□□□□□ -1.36
BDNFP23560 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 AC073581.1-201ENST00000519036 575 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.58□□□□□ -1.36
BDNFP23560 AC018442.3-201ENST00000523025 183 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.58□□□□□ -1.36
BDNFP23560 OR8X1P-201ENST00000534542 869 ntBASIC6.58□□□□□ -1.36
BDNFP23560 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.58□□□□□ -1.36
BDNFP23560 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.58□□□□□ -1.36
BDNFP23560 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.58□□□□□ -1.36
BDNFP23560 AP001437.1-201ENST00000608783 456 ntBASIC6.58□□□□□ -1.36
BDNFP23560 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.58□□□□□ -1.36
BDNFP23560 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BDNFP23560 AL122125.1-201ENST00000616999 600 ntBASIC6.58□□□□□ -1.36
BDNFP23560 FAM27E2-201ENST00000619668 403 ntBASIC6.58□□□□□ -1.36
BDNFP23560 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.58□□□□□ -1.36
BDNFP23560 SAMMSON-209ENST00000641222 1100 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms