Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 PRELID1P1-201ENST00000403549 660 ntBASIC6.45□□□□□ -1.38
TPM1P09493 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 SEPT14P12-201ENST00000442280 560 ntBASIC6.45□□□□□ -1.38
TPM1P09493 ZNF619P1-201ENST00000446539 752 ntBASIC6.45□□□□□ -1.38
TPM1P09493 AC097359.1-201ENST00000447946 463 ntBASIC6.45□□□□□ -1.38
TPM1P09493 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM1P09493 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM1P09493 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 MORF4L2P1-201ENST00000503761 858 ntBASIC6.45□□□□□ -1.38
TPM1P09493 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM1P09493 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.45□□□□□ -1.38
TPM1P09493 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.45□□□□□ -1.38
TPM1P09493 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 MRPL45P2-203ENST00000573318 473 ntBASIC6.45□□□□□ -1.38
TPM1P09493 AC022400.9-201ENST00000623633 273 ntBASIC6.45□□□□□ -1.38
TPM1P09493 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TPM1P09493 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TPM1P09493 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TPM1P09493 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 AL138820.1-201ENST00000617901 5305 ntBASIC6.44□□□□□ -1.38
TPM1P09493 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TPM1P09493 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 AL132875.1-201ENST00000403623 949 ntBASIC6.44□□□□□ -1.38
TPM1P09493 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 VN1R21P-201ENST00000426703 765 ntBASIC6.44□□□□□ -1.38
TPM1P09493 AC092646.1-201ENST00000427142 901 ntBASIC6.44□□□□□ -1.38
TPM1P09493 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM1P09493 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM1P09493 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM1P09493 RPL12P18-201ENST00000437175 325 ntBASIC6.44□□□□□ -1.38
TPM1P09493 HMGN1P32-201ENST00000441744 256 ntBASIC6.44□□□□□ -1.38
TPM1P09493 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM1P09493 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 MEMO1P4-201ENST00000453590 386 ntBASIC6.44□□□□□ -1.38
TPM1P09493 RPL12P24-201ENST00000474907 486 ntBASIC6.44□□□□□ -1.38
TPM1P09493 RPL38P3-201ENST00000484463 213 ntBASIC6.44□□□□□ -1.38
TPM1P09493 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM1P09493 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM1P09493 MIR2117-201ENST00000516780 80 ntBASIC6.44□□□□□ -1.38
TPM1P09493 AC126615.2-201ENST00000553003 515 ntBASIC6.44□□□□□ -1.38
TPM1P09493 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.44□□□□□ -1.38
TPM1P09493 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 AL353729.2-201ENST00000605859 1249 ntBASIC6.44□□□□□ -1.38
TPM1P09493 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.44□□□□□ -1.38
TPM1P09493 AC068726.1-201ENST00000610993 341 ntBASIC6.44□□□□□ -1.38
TPM1P09493 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.44□□□□□ -1.38
TPM1P09493 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TPM1P09493 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TPM1P09493 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
TPM1P09493 RBMY1HP-201ENST00000382759 1389 ntBASIC6.44□□□□□ -1.38
TPM1P09493 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 PARP4P2-201ENST00000446672 3326 ntBASIC6.43□□□□□ -1.38
TPM1P09493 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
TPM1P09493 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.43□□□□□ -1.38
TPM1P09493 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TPM1P09493 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 SNRPEP6-201ENST00000407465 277 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AL139805.1-201ENST00000407837 289 ntBASIC6.43□□□□□ -1.38
TPM1P09493 RN7SKP279-201ENST00000411383 298 ntBASIC6.43□□□□□ -1.38
TPM1P09493 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.43□□□□□ -1.38
TPM1P09493 RNGTTP1-201ENST00000420965 728 ntBASIC6.43□□□□□ -1.38
TPM1P09493 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.43□□□□□ -1.38
TPM1P09493 AC242426.1-201ENST00000435270 960 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.43□□□□□ -1.38
TPM1P09493 RN7SL790P-201ENST00000474043 298 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AC006539.1-201ENST00000481419 501 ntBASIC6.43□□□□□ -1.38
TPM1P09493 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 AC114324.2-202ENST00000503812 134 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.43□□□□□ -1.38
TPM1P09493 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AC020937.1-201ENST00000519677 1013 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms