Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 RNU1-136P-201ENST00000384181 164 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 RPL12P23-201ENST00000405880 490 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 NACAP7-201ENST00000407371 609 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 AL603882.1-201ENST00000463059 681 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 MYL12BP2-201ENST00000503948 512 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 OR4D12P-201ENST00000509361 911 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.47□□□□□ -1.69
CXCL1P09341 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 FCGR1CP-201ENST00000579737 1127 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 AC026898.1-201ENST00000586404 571 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 AL591167.1-201ENST00000607321 456 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 AL589743.6-201ENST00000611025 117 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 AC027506.1-201ENST00000621395 198 ntBASIC4.47□□□□□ -1.69
CXCL1P09341 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CXCL1P09341 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CXCL1P09341 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CXCL1P09341 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CXCL1P09341 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.46□□□□□ -1.69
CXCL1P09341 AC114947.2-201ENST00000565748 2125 ntBASIC4.46□□□□□ -1.69
CXCL1P09341 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CXCL1P09341 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CXCL1P09341 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CXCL1P09341 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CXCL1P09341 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CXCL1P09341 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CXCL1P09341 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL1P09341 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CXCL1P09341 RNA5SP375-201ENST00000362975 119 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 UBBP2-201ENST00000376781 231 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CXCL1P09341 SETP15-201ENST00000412724 337 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 AL161742.1-201ENST00000418154 584 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 PPIAP23-201ENST00000420099 497 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AC002127.1-201ENST00000421305 225 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.46□□□□□ -1.7
CXCL1P09341 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 NDUFB4P8-201ENST00000435351 367 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL645939.3-201ENST00000435408 225 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC239800.1-201ENST00000442049 719 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL157385.1-201ENST00000446973 268 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 SDC4P-201ENST00000453285 601 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 AC021660.1-201ENST00000465006 554 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CXCL1P09341 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 AP006245.2-201ENST00000522004 300 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.46□□□□□ -1.7
CXCL1P09341 OR4A42P-201ENST00000531397 938 ntBASIC4.46□□□□□ -1.7
CXCL1P09341 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.46□□□□□ -1.7
CXCL1P09341 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms