Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC011611.5-201ENST00000552477 578 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 AC107982.3-201ENST00000584957 985 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC083760.1-201ENST00000589621 670 ntBASIC7.47□□□□□ -1.21
SOX1O00570 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 AL583832.1-201ENST00000603227 784 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC108747.1-201ENST00000609508 535 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC116651.1-201ENST00000609724 556 ntBASIC7.47□□□□□ -1.21
SOX1O00570 MIR6748-201ENST00000610433 71 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC138749.5-201ENST00000611461 208 ntBASIC7.47□□□□□ -1.21
SOX1O00570 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 AC006328.2-201ENST00000623198 397 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC015660.5-201ENST00000623238 564 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC012005.2-201ENST00000624333 397 ntBASIC7.47□□□□□ -1.21
SOX1O00570 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 AC097634.1-201ENST00000604491 2467 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SOX1O00570 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.46□□□□□ -1.21
SOX1O00570 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SOX1O00570 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
SOX1O00570 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.46□□□□□ -1.21
SOX1O00570 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SOX1O00570 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SOX1O00570 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.46□□□□□ -1.21
SOX1O00570 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SOX1O00570 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX1O00570 TMSB4XP4-201ENST00000323496 618 ntBASIC7.46□□□□□ -1.22
SOX1O00570 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 RNY3P14-201ENST00000384309 102 ntBASIC7.46□□□□□ -1.22
SOX1O00570 Y_RNA.516-201ENST00000384541 124 ntBASIC7.46□□□□□ -1.22
SOX1O00570 RN7SKP166-201ENST00000410812 305 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX1O00570 AL049610.1-201ENST00000423374 372 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 MTND4P28-201ENST00000426217 387 ntBASIC7.46□□□□□ -1.22
SOX1O00570 RPS4XP16-201ENST00000427198 791 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX1O00570 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 AL354941.1-201ENST00000438600 464 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 DNAJC19P5-201ENST00000443295 316 ntBASIC7.46□□□□□ -1.22
SOX1O00570 MTCO1P19-201ENST00000443487 500 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 RNU7-157P-201ENST00000459600 66 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC068228.1-201ENST00000461723 211 ntBASIC7.46□□□□□ -1.22
SOX1O00570 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
SOX1O00570 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.46□□□□□ -1.22
SOX1O00570 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SOX1O00570 SNORD46.2-201ENST00000516021 102 ntBASIC7.46□□□□□ -1.22
SOX1O00570 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 AC136619.2-201ENST00000563361 631 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC027104.1-201ENST00000563702 681 ntBASIC7.46□□□□□ -1.22
SOX1O00570 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 GLUD1P8-201ENST00000585063 203 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 OR7A8P-201ENST00000595427 913 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 OR2BH1P-201ENST00000608850 864 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC127024.6-201ENST00000621598 424 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AL357562.1-201ENST00000624911 609 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms