Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RBBP4P5-201ENST00000398583 1266 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 DPPA2P2-201ENST00000418220 897 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AC015977.1-201ENST00000418887 292 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 MTND4P24-201ENST00000424002 397 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXN3O00409 VN1R20P-201ENST00000425215 966 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXN3O00409 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 SCAND3P1-201ENST00000439854 1060 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 RPS18P1-201ENST00000447840 458 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AC009963.4-201ENST00000448535 339 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AL355032.1-201ENST00000472981 438 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AC015908.1-201ENST00000478739 476 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AL035690.1-201ENST00000490892 383 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.61□□□□□ -1.35
FOXN3O00409 AC095052.1-201ENST00000509955 863 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 CYP4F27P-201ENST00000514557 494 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.61□□□□□ -1.35
FOXN3O00409 AL121839.1-201ENST00000556233 1185 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 NDUFB9P1-201ENST00000604683 510 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 AC008555.7-201ENST00000605008 583 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 RNU6-84P-201ENST00000607737 102 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 OR5AC4P-202ENST00000642086 985 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.61□□□□□ -1.35
FOXN3O00409 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
FOXN3O00409 AC011416.1-201ENST00000514947 1732 ntBASIC6.61□□□□□ -1.35
FOXN3O00409 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
FOXN3O00409 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
FOXN3O00409 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.61□□□□□ -1.35
FOXN3O00409 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
FOXN3O00409 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXN3O00409 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
FOXN3O00409 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
FOXN3O00409 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 AL121835.1-201ENST00000404250 354 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 RNU4-64P-201ENST00000410795 131 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.6□□□□□ -1.35
FOXN3O00409 GLUD1P9-201ENST00000420997 1173 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC016027.5-201ENST00000427227 210 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AL356121.1-201ENST00000442911 156 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXN3O00409 STRADBP1-201ENST00000478954 1281 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.6□□□□□ -1.35
FOXN3O00409 AC114728.1-201ENST00000488289 483 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC104629.1-201ENST00000494226 508 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 OR9N1P-202ENST00000494289 481 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 MTCO1P31-201ENST00000506355 492 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 AC106806.2-201ENST00000509365 500 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 HMGB1P46-201ENST00000520062 610 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
FOXN3O00409 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.6□□□□□ -1.35
FOXN3O00409 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 GLYATL1P2-202ENST00000588046 902 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 AC141002.1-201ENST00000607025 279 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 RN7SL261P-201ENST00000613441 282 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC015819.1-201ENST00000613588 663 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC012676.3-201ENST00000614983 479 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AC015722.2-201ENST00000622210 551 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXN3O00409 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXN3O00409 PROS2P-201ENST00000474651 1951 ntBASIC6.6□□□□□ -1.35
FOXN3O00409 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms