Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 AL049634.1-201ENST00000453770 1720 ntBASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 AC022164.1-201ENST00000568767 2673 ntBASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 GNL2P1-201ENST00000451274 2190 ntBASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 AC092070.2-203ENST00000598377 3644 ntBASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CLIP2Q9UDT6 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.09□□□□□ -1.28
CLIP2Q9UDT6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CLIP2Q9UDT6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AL590399.4-201ENST00000436561 601 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC112187.1-201ENST00000455837 479 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 snoU13.29-201ENST00000459370 104 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 SCARNA18.1-201ENST00000516330 83 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 WBP1LP3-201ENST00000523033 208 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC008521.2-201ENST00000591021 259 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.08□□□□□ -1.28
CLIP2Q9UDT6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 CCNT2P1-201ENST00000423082 1315 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 BX323845.3-201ENST00000428215 527 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC083795.1-201ENST00000491760 320 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 PSMA2P2-201ENST00000504319 686 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 IGKV2-19-201ENST00000518132 283 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC092121.1-201ENST00000569452 202 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AL121768.1-201ENST00000613917 2544 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC006600.2-201ENST00000624834 2506 ntBASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CLIP2Q9UDT6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 MSL3P1-202ENST00000440028 1468 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL096800.1-201ENST00000405326 893 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 MIR1203-201ENST00000408812 85 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 BX284632.2-201ENST00000421091 399 ntBASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CLIP2Q9UDT6 AC092651.1-201ENST00000426110 312 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms