Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AL121977.1-201ENST00000401636 979 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AL138787.1-202ENST00000437804 898 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 RPSAP40-201ENST00000442343 891 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 RAD1P2-201ENST00000446414 663 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC083795.1-201ENST00000491760 320 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC018558.5-201ENST00000565840 952 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC020915.5-201ENST00000596836 964 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 GMCL1P2-201ENST00000605230 823 ntBASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
BLOC1S4Q9NUP1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC245100.2-201ENST00000454544 1679 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SNRPEP6-201ENST00000407465 277 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC092651.1-201ENST00000426110 312 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL445928.1-201ENST00000435545 222 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RPS3AP38-201ENST00000435889 763 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL390879.1-201ENST00000439143 386 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL356390.1-201ENST00000455684 397 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 Z83838.1-202ENST00000456225 839 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC023245.1-201ENST00000468501 517 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RPL38P3-201ENST00000484463 213 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RPL37P23-201ENST00000492641 294 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC008629.2-201ENST00000503783 483 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 PRMT5P1-201ENST00000514351 598 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RNU6-751P-201ENST00000516382 101 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 RN7SKP238-201ENST00000516483 249 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC024405.1-201ENST00000532521 1042 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC108673.3-201ENST00000609183 335 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 AC025262.3-201ENST00000623666 360 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 SNX18P12-201ENST00000624821 759 ntBASIC6.65□□□□□ -1.34
BLOC1S4Q9NUP1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 AC012254.3-201ENST00000591183 2117 ntBASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 AC093225.1-201ENST00000506867 1408 ntBASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
BLOC1S4Q9NUP1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms