Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 UG0898H09-202ENST00000623646 7040 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 NACA3P-201ENST00000359690 648 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 VDAC2P1-201ENST00000399358 958 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 RNU4-74P-201ENST00000411280 161 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC092646.1-201ENST00000427142 901 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR2B8P-201ENST00000432841 938 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AL121601.2-201ENST00000438019 707 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 SDHCP3-201ENST00000445371 506 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AL135929.1-201ENST00000449287 552 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 ZNF114P1-201ENST00000453500 292 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 DSTNP2-201ENST00000504533 515 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC113347.3-201ENST00000509113 148 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 GTF2F2P1-201ENST00000511083 675 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 MTCO3P15-201ENST00000526563 574 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AP006587.6-201ENST00000582128 1091 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC087683.1-201ENST00000591187 441 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 PRR13P5-201ENST00000596581 442 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC021749.1-201ENST00000604322 607 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC006270.3-201ENST00000605967 1036 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC091768.1-201ENST00000609258 930 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 RMST_5.1-201ENST00000618704 126 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 OR11H2-202ENST00000641517 1085 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
SSU72Q9NP77 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 AC004520.1-201ENST00000608362 1413 ntBASIC7.01□□□□□ -1.29
SSU72Q9NP77 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SSU72Q9NP77 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 AL136298.2-201ENST00000556497 1570 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC025809.2-201ENST00000625085 1802 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AL391994.1-201ENST00000254724 282 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 RPL24P4-201ENST00000326586 421 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 RNA5SP71-201ENST00000362967 126 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 Y_RNA.192-201ENST00000363977 102 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 SNORA70.8-201ENST00000384231 136 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 RNU6-1119P-201ENST00000384349 108 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC133644.1-201ENST00000398171 937 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms