Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AC005077.1-201ENST00000449226 375 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AC093719.1-201ENST00000480427 441 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 RN7SL193P-201ENST00000491708 276 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CAB39P1-201ENST00000502277 460 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AP002981.1-201ENST00000517692 975 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AC024651.2-201ENST00000562480 2098 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 AL157831.2-201ENST00000564681 3095 ntBASIC6.36□□□□□ -1.39
EBF3Q9H4W6 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.36□□□□□ -1.39
EBF3Q9H4W6 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC119674.1-213ENST00000641177 1386 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 OR52B3P-201ENST00000314715 928 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC087752.1-201ENST00000391360 558 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AL445238.1-204ENST00000400311 463 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 RPS17P17-201ENST00000419392 409 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC021876.1-201ENST00000425959 359 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 MGAT2P1-201ENST00000449718 797 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC104629.1-201ENST00000494226 508 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AF117829.2-201ENST00000619538 361 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 MIR6886-201ENST00000619864 61 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AL136228.1-201ENST00000622221 319 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC020923.1-201ENST00000624021 917 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AP002371.2-201ENST00000624450 503 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC011416.1-201ENST00000514947 1732 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AC123769.1-201ENST00000530992 3192 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 AF287957.1-201ENST00000607368 1595 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 MTCO1P11-201ENST00000429111 1528 ntBASIC6.35□□□□□ -1.39
EBF3Q9H4W6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.35□□□□□ -1.39
EBF3Q9H4W6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 AC105235.1-201ENST00000623208 1816 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 SAMMSON-210ENST00000641260 1308 ntBASIC6.34□□□□□ -1.39
EBF3Q9H4W6 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.34□□□□□ -1.39
EBF3Q9H4W6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms