Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC002519.2-203ENST00000567043 837 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 NPIPB1P-202ENST00000588786 828 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC100767.2-201ENST00000604840 693 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 AL021707.7-201ENST00000607991 416 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AP001264.1-201ENST00000620602 703 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC011815.2-201ENST00000618230 2021 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM4Q9C037 RNA5SP453-201ENST00000362503 119 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 NPM1P38-201ENST00000403835 865 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AL035422.1-201ENST00000414193 397 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC066692.1-201ENST00000421721 457 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC009237.1-201ENST00000442127 744 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 MGAT2P1-201ENST00000449718 797 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 DEFB109A-201ENST00000482450 265 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 PPIAP19-201ENST00000486414 492 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC008429.4-201ENST00000521201 182 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 TRIM77BP-201ENST00000524985 1119 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC027369.2-201ENST00000528030 440 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC023245.2-201ENST00000530760 2978 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 CYCSP38-201ENST00000559840 322 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM4Q9C037 BNIP3P32-201ENST00000600015 554 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC006363.1-201ENST00000603806 463 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 AC024589.2-201ENST00000605642 1294 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.15□□□□□ -1.42
TRIM4Q9C037 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM4Q9C037 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM4Q9C037 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM4Q9C037 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM4Q9C037 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM4Q9C037 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM4Q9C037 SHQ1P1-201ENST00000437111 1544 ntBASIC6.15□□□□□ -1.43
TRIM4Q9C037 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC093849.1-201ENST00000563631 2209 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 TMSB4XP4-201ENST00000323496 618 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 PPIAP24-201ENST00000328558 471 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AL121835.1-201ENST00000404250 354 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 MRPS21P5-201ENST00000417885 231 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AL354707.3-201ENST00000427308 331 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 TUBB4BP6-201ENST00000437576 479 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 MORF4L2P1-201ENST00000503761 858 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC008429.2-201ENST00000523057 864 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC027544.3-201ENST00000535082 757 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AL162632.2-201ENST00000553933 399 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC026956.1-201ENST00000558741 396 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM4Q9C037 SNORD96A-201ENST00000606577 79 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC093635.1-201ENST00000609028 555 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC004948.1-201ENST00000609858 672 ntBASIC6.14□□□□□ -1.43
TRIM4Q9C037 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM4Q9C037 AC073488.6-201ENST00000632293 754 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms