Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AL121579.2-201ENST00000555466 590 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC024589.2-201ENST00000605642 1294 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC092681.3-201ENST00000609463 678 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC024255.1-201ENST00000614376 102 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC073488.6-201ENST00000632293 754 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AC093225.1-201ENST00000506867 1408 ntBASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CHMP4AQ9BY43 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AL359976.1-201ENST00000418655 3528 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 SNORD8-201ENST00000363915 110 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 GCNT1P4-201ENST00000404096 329 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 RN7SKP161-201ENST00000411110 305 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 RN7SKP108-201ENST00000411367 328 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 RPS7P8-201ENST00000418311 581 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC007679.3-201ENST00000434035 414 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 C1DP3-201ENST00000455013 423 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 STRADBP1-201ENST00000478954 1281 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC023818.1-201ENST00000498379 384 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AP005639.1-201ENST00000526939 192 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 OR6M2P-201ENST00000529831 871 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC027281.1-201ENST00000574178 758 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC008833.1-201ENST00000611633 691 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 RBPJP2-201ENST00000618187 1444 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC011369.2-201ENST00000624423 1567 ntBASIC8□□□□□ -1.13
CHMP4AQ9BY43 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CHMP4AQ9BY43 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8□□□□□ -1.13
CHMP4AQ9BY43 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC022905.1-201ENST00000503430 3048 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 SNORA21-201ENST00000362423 132 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 RNA5SP156-201ENST00000410250 110 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC002524.1-201ENST00000411687 547 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC069154.1-201ENST00000432914 542 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AL356390.1-201ENST00000455684 397 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 RARRES2P3-201ENST00000457739 473 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 PFN1P8-201ENST00000497012 543 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 LSM3P4-201ENST00000502948 309 ntBASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.99□□□□□ -1.13
CHMP4AQ9BY43 AC116667.2-201ENST00000641075 823 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms