Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 NPM1P42-201ENST00000560329 862 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC018558.5-201ENST00000565840 952 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC006115.2-201ENST00000596823 202 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
SIN3AQ96ST3 MAPK10-261ENST00000641050 3109 ntBASIC8.38□□□□□ -1.07
SIN3AQ96ST3 AC092070.2-203ENST00000598377 3644 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 NIFKP3-201ENST00000417799 865 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 MTND6P12-201ENST00000428247 522 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AC105384.2-201ENST00000508433 640 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.37□□□□□ -1.07
SIN3AQ96ST3 OR4A6P-201ENST00000534364 970 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AC063977.5-201ENST00000601044 974 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 AC007114.2-201ENST00000576014 4281 ntBASIC8.37□□□□□ -1.07
SIN3AQ96ST3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 MIR130A-201ENST00000385274 89 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL662874.1-201ENST00000426065 230 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC007998.1-201ENST00000474156 672 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC099521.1-201ENST00000482557 334 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL133481.2-203ENST00000607558 139 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 RN7SL544P-201ENST00000617232 284 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AL035661.1-201ENST00000620459 1144 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 RN7SL763P-201ENST00000620922 284 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC005831.1-201ENST00000624384 1697 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 AC106872.5-201ENST00000508856 1416 ntBASIC8.36□□□□□ -1.07
SIN3AQ96ST3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
SIN3AQ96ST3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 RNA5SP510-201ENST00000364697 99 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 MTND4LP17-201ENST00000414607 293 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 CRIP1P1-201ENST00000427567 185 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AL390879.1-201ENST00000439143 386 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 NENFP3-201ENST00000503735 313 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 MRPS16P1-201ENST00000523462 412 ntBASIC8.35□□□□□ -1.07
SIN3AQ96ST3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SIN3AQ96ST3 SRRM1P3-201ENST00000426911 2678 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms