Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL21A1Q96P44 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 RNU105B-201ENST00000364478 208 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 RN7SKP186-201ENST00000365371 303 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AL096829.1-201ENST00000413677 457 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RPS15AP30-201ENST00000420976 390 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 RPL12P12-201ENST00000424633 501 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC097463.1-201ENST00000447288 481 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 ACA64.4-201ENST00000459070 127 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 TRBV5-2-201ENST00000489095 273 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RNA5SP473-201ENST00000516402 125 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC011853.1-201ENST00000518911 454 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 OR56A7P-201ENST00000524865 941 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC092332.1-201ENST00000563684 829 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC125494.2-201ENST00000602431 657 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC073593.1-201ENST00000624500 411 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC104966.1-201ENST00000467010 1464 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 GTF2IP4-201ENST00000453092 2054 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL21A1Q96P44 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 AC138907.8-201ENST00000623981 2256 ntBASIC5.62□□□□□ -1.51
COL21A1Q96P44 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL21A1Q96P44 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AL449283.1-201ENST00000602631 3403 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL21A1Q96P44 OR10R3P-201ENST00000361688 942 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 NPM1P37-201ENST00000403105 874 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 RNA5SP431-201ENST00000410312 120 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC009506.2-201ENST00000420635 840 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC023141.3-201ENST00000436698 278 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 AL353662.1-201ENST00000439099 327 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 TRIM60P16-201ENST00000444048 694 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RBMY2AP-201ENST00000445405 1157 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 FTLP8-201ENST00000446770 267 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RBMY2CP-201ENST00000448575 1157 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RBMY2DP-202ENST00000448881 1157 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RBMY2BP-202ENST00000451071 1156 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 TOMM22P4-201ENST00000511318 336 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 PRMT5P1-201ENST00000514351 598 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 snoU109.5-201ENST00000516231 132 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL21A1Q96P44 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC006512.2-201ENST00000543250 486 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 MTCO1P28-201ENST00000574177 1528 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 MIR4271-201ENST00000582451 67 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AC091167.5-201ENST00000605689 894 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 AL645933.2-201ENST00000606743 1207 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 uc_338.26-201ENST00000612659 160 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 AL355480.1-201ENST00000629041 99 ntBASIC5.61□□□□□ -1.51
COL21A1Q96P44 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
COL21A1Q96P44 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms