Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL445466.1-201ENST00000448432 357 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 RPS7P10-201ENST00000464254 603 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC018639.1-201ENST00000492994 442 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 HMGN2P47-201ENST00000559378 272 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC145423.1-201ENST00000605712 336 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 AL353729.2-201ENST00000605859 1249 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CCDC42Q96M95 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AC009962.1-201ENST00000567327 3813 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 AL137058.3-201ENST00000624531 3099 ntBASIC6.27□□□□□ -1.41
CCDC42Q96M95 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC42Q96M95 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 MFSD8-219ENST00000641228 2559 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 RN7SKP185-201ENST00000362813 326 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 RN7SKP257-201ENST00000364525 309 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 RNU1-136P-201ENST00000384181 164 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 RNA5SP198-201ENST00000410376 127 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 RPL7AP51-201ENST00000422016 760 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC015983.1-201ENST00000441577 373 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 MEMO1P4-201ENST00000453590 386 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 RN7SL197P-201ENST00000466981 299 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC026782.2-201ENST00000510845 636 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 GAPDHP62-201ENST00000515313 990 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 HMGN1P26-201ENST00000558737 303 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC073333.2-201ENST00000603589 769 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AL021918.2-201ENST00000613415 194 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC007204.1-201ENST00000621794 555 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 AC093671.1-201ENST00000624981 2929 ntBASIC6.26□□□□□ -1.41
CCDC42Q96M95 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
CCDC42Q96M95 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC42Q96M95 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CCDC42Q96M95 SELENOWP1-201ENST00000322792 252 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 AL354766.1-201ENST00000423396 542 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 RPS23P9-201ENST00000448848 438 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 PPIAP7-201ENST00000454070 489 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC099670.1-201ENST00000455141 783 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC105384.2-201ENST00000508433 640 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC108103.1-201ENST00000511286 446 ntBASIC6.25□□□□□ -1.41
CCDC42Q96M95 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms