Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 UGT2B24P-201ENST00000514441 1597 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 ZNF101P1-201ENST00000435701 1720 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 GCNT6-201ENST00000379591 934 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 RNU6-925P-201ENST00000384629 104 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL360271.1-201ENST00000395679 510 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL359694.1-201ENST00000403247 604 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 RPS17P17-201ENST00000419392 409 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC097721.1-201ENST00000427150 1253 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 TXNP2-201ENST00000443918 295 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC118758.1-202ENST00000454719 225 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC093763.2-201ENST00000505334 1223 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC131392.1-201ENST00000506490 633 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC083906.1-201ENST00000509298 406 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 RN7SKP183-201ENST00000517169 324 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 IGHV1-14-201ENST00000523391 241 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AP001000.1-201ENST00000526843 742 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC024405.1-201ENST00000532521 1042 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC092718.4-201ENST00000566639 716 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 MIR4271-201ENST00000582451 67 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC093388.1-201ENST00000609166 430 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 MIR6780B-201ENST00000610307 79 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC104763.3-201ENST00000613765 618 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC016957.2-201ENST00000616998 848 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL445493.3-201ENST00000619568 477 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 AC009269.6-201ENST00000621778 588 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL049777.1-201ENST00000622740 518 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 CASC19-274ENST00000642018 970 ntBASIC6.23□□□□□ -1.41
VPS50Q96JG6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VPS50Q96JG6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.23□□□□□ -1.41
VPS50Q96JG6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL355834.1-201ENST00000556602 3965 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC090181.3-201ENST00000624777 1514 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 SNORA70.3-201ENST00000365075 132 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 RNA5SP85-201ENST00000365378 119 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL353625.1-202ENST00000366273 571 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 LCN1P2-201ENST00000372030 223 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 RNU6-40P-201ENST00000384254 107 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 VN1R12P-201ENST00000403778 876 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 ARAFP1-201ENST00000422172 605 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC092106.2-201ENST00000436597 487 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC093166.3-201ENST00000448785 303 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VPS50Q96JG6 FCF1P6-201ENST00000456841 595 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 LDHBP2-201ENST00000456969 1005 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 snoU13.29-201ENST00000459370 104 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.22□□□□□ -1.41
VPS50Q96JG6 AC093870.1-201ENST00000506837 213 ntBASIC6.22□□□□□ -1.41
VPS50Q96JG6 OR52H2P-201ENST00000514607 902 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms