Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 CEACAMP9-201ENST00000442990 513 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AL445528.2-201ENST00000620582 470 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SNURFL-201ENST00000309296 343 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SNORA16A-201ENST00000384342 137 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL133325.1-201ENST00000421090 382 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 OR2AM1P-201ENST00000422137 422 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC112187.1-201ENST00000455837 479 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC092324.1-201ENST00000468671 324 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC209154.1-201ENST00000582156 337 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL139099.4-201ENST00000614802 114 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC012618.3-205ENST00000637896 1496 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 DPY19L1P1-201ENST00000417811 2594 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL355834.1-201ENST00000556602 3965 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 OR6D1P-201ENST00000436165 939 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC139365.2-201ENST00000517972 253 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CDY5P-201ENST00000411487 1580 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CDY9P-201ENST00000451397 1580 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 MTND4LP17-201ENST00000414607 293 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CEACAMP7-201ENST00000444105 496 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC020898.1-201ENST00000474167 787 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC025574.2-201ENST00000615621 514 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC132068.1-201ENST00000623805 459 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 AL031595.3-201ENST00000624919 14262 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 CASC19-281ENST00000642118 1554 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 RNA5SP319-201ENST00000362768 119 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SNORA70.2-201ENST00000364506 135 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 MIR130A-201ENST00000385274 89 ntBASIC3.88□□□□□ -1.79
ALMS1Q8TCU4 SLC35E1P1-201ENST00000419313 864 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms