Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL133243.2-201ENST00000610331 1621 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC002525.1-201ENST00000624392 1622 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL158152.1-201ENST00000602652 1435 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 DHFRP2-201ENST00000414224 547 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 NMD3P2-201ENST00000421815 761 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC112492.2-201ENST00000432774 1030 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 CYCSP51-201ENST00000443545 318 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 FRG2FP-204ENST00000453982 852 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AP002371.1-201ENST00000463604 433 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 MTND3P6-201ENST00000485242 339 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 RN7SL350P-201ENST00000492591 299 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC093664.1-201ENST00000511779 289 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 RN7SKP5-201ENST00000517045 272 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC130366.1-201ENST00000526505 1192 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC006115.2-201ENST00000596823 202 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AL133481.2-203ENST00000607558 139 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC022106.1-201ENST00000612834 766 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC099654.15-201ENST00000639802 509 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 AC015689.2-201ENST00000528172 1738 ntBASIC5.08□□□□□ -1.6
BEST4Q8NFU0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BEST4Q8NFU0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AC104964.3-201ENST00000606115 2860 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 OR7E25P-201ENST00000344844 931 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 RNA5SP346-201ENST00000363541 121 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AC240504.1-201ENST00000395709 845 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AL358178.1-201ENST00000407698 397 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 RNA5SP155-201ENST00000411154 129 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AL139135.1-201ENST00000412675 209 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.07□□□□□ -1.6
BEST4Q8NFU0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 SUMO2P8-201ENST00000434672 286 ntBASIC5.07□□□□□ -1.6
BEST4Q8NFU0 AC242426.1-201ENST00000435270 960 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms