Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 COX6B1P4-201ENST00000519826 484 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC131935.1-201ENST00000524621 333 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 MTND4LP25-201ENST00000570218 163 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AP001496.3-201ENST00000580230 913 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL008723.3-201ENST00000608926 449 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL359976.1-201ENST00000418655 3528 ntBASIC6.48□□□□□ -1.37
CCDC38Q502W7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC38Q502W7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC38Q502W7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC087516.1-201ENST00000561236 2428 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC068446.1-201ENST00000556425 1549 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 GNG5P2-201ENST00000372054 207 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 RPL10P10-201ENST00000403509 664 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 MIR1266-201ENST00000408125 84 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 RN7SKP17-201ENST00000411242 351 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL357078.2-201ENST00000416486 427 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL139184.1-202ENST00000422303 222 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC073464.3-201ENST00000422564 712 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 PRUNEP1-201ENST00000425846 705 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC007563.3-201ENST00000433233 371 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL590762.3-201ENST00000436372 640 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC074367.1-201ENST00000438685 1125 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 COL11A2P1-205ENST00000441798 676 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 RPL31P11-202ENST00000454082 372 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 RN7SL552P-201ENST00000462094 276 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 MTND3P24-201ENST00000506306 329 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 MINOS1P4-201ENST00000515470 318 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 SNORA70.11-201ENST00000515987 138 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 SNORA70.13-201ENST00000516116 138 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL136520.1-202ENST00000555494 763 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 HMGN1P26-201ENST00000558737 303 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC027796.1-201ENST00000575593 512 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC036176.3-201ENST00000602456 418 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC004805.3-201ENST00000603178 310 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 NDUFB9P1-201ENST00000604683 510 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 LSM1P2-201ENST00000604911 322 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL021368.3-201ENST00000607119 578 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AL355802.4-201ENST00000607635 548 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 MIR6085-201ENST00000618314 110 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms