Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC009506.2-201ENST00000420635 840 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AL139158.1-201ENST00000424719 340 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC099677.3-201ENST00000427081 395 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.83□□□□□ -1.48
CDKL1Q00532 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC023141.3-201ENST00000436698 278 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 VN1R96P-201ENST00000446052 858 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.83□□□□□ -1.48
CDKL1Q00532 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC023245.1-201ENST00000468501 517 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC112484.3-201ENST00000505910 329 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 RN7SKP288-201ENST00000516227 268 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.83□□□□□ -1.48
CDKL1Q00532 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC007346.2-201ENST00000564816 892 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC007346.1-201ENST00000569208 867 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC138207.8-204ENST00000579588 527 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.83□□□□□ -1.48
CDKL1Q00532 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.83□□□□□ -1.48
CDKL1Q00532 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AC092681.3-201ENST00000609463 678 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 PCA3_2.1-201ENST00000612507 409 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC069542.2-201ENST00000624816 216 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CDKL1Q00532 HSPD1P9-201ENST00000420325 1636 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDKL1Q00532 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDKL1Q00532 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDKL1Q00532 NCOA4P2-201ENST00000340589 1813 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
CDKL1Q00532 AL121839.2-201ENST00000565058 6943 ntBASIC5.83□□□□□ -1.48
CDKL1Q00532 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 RBPJP7-201ENST00000442803 1447 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 RBPJP5-201ENST00000449433 1447 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.82□□□□□ -1.48
CDKL1Q00532 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 AC016745.2-201ENST00000608834 3443 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.82□□□□□ -1.48
CDKL1Q00532 NME1P1-201ENST00000420914 382 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 OR6C71P-201ENST00000432580 913 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AC096632.2-201ENST00000438139 1239 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 AL445466.1-201ENST00000448432 357 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 RPL9P15-201ENST00000491096 532 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.82□□□□□ -1.48
CDKL1Q00532 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AL163952.1-202ENST00000569625 600 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 OR1E3-201ENST00000575608 948 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AC012254.3-201ENST00000591183 2117 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CDKL1Q00532 AC068768.2-201ENST00000602352 343 ntBASIC5.82□□□□□ -1.48
CDKL1Q00532 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.82□□□□□ -1.48
CDKL1Q00532 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
CDKL1Q00532 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.82□□□□□ -1.48
CDKL1Q00532 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDKL1Q00532 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.81□□□□□ -1.48
CDKL1Q00532 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDKL1Q00532 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CDKL1Q00532 AP000473.2-201ENST00000602659 1537 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
CDKL1Q00532 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDKL1Q00532 MIR133A2-201ENST00000347538 102 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 RPL35AP3-201ENST00000414680 288 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 AL445928.1-201ENST00000435545 222 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 RPS7P3-201ENST00000443360 580 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 TIMM8BP2-201ENST00000445940 251 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 AL603882.1-201ENST00000463059 681 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 AC018797.1-201ENST00000510791 255 ntBASIC5.81□□□□□ -1.48
CDKL1Q00532 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.81□□□□□ -1.48
CDKL1Q00532 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.81□□□□□ -1.48
CDKL1Q00532 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDKL1Q00532 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDKL1Q00532 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.81□□□□□ -1.48
CDKL1Q00532 AL121594.2-201ENST00000541658 472 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms