Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.4□□□□□ -1.38
GFRA1P56159 AL034408.1-201ENST00000637712 664 ntBASIC6.4□□□□□ -1.38
GFRA1P56159 FP325313.1-201ENST00000638228 703 ntBASIC6.4□□□□□ -1.38
GFRA1P56159 AC119674.1-212ENST00000641155 993 ntBASIC6.4□□□□□ -1.38
GFRA1P56159 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GFRA1P56159 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.4□□□□□ -1.38
GFRA1P56159 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
GFRA1P56159 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.4□□□□□ -1.39
GFRA1P56159 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.4□□□□□ -1.39
GFRA1P56159 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GFRA1P56159 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 AL390237.1-201ENST00000404226 1415 ntBASIC6.4□□□□□ -1.39
GFRA1P56159 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
GFRA1P56159 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
GFRA1P56159 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.4□□□□□ -1.39
GFRA1P56159 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GFRA1P56159 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC012213.2-201ENST00000562917 4597 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 RNU6-543P-201ENST00000362576 108 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
GFRA1P56159 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 PDCL3P5-201ENST00000398028 722 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 EEF1GP6-201ENST00000402309 905 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GFRA1P56159 RNU6-757P-201ENST00000410334 100 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 Y_RNA.619-201ENST00000410951 90 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 RNA5SP280-201ENST00000411230 115 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.39□□□□□ -1.39
GFRA1P56159 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 CHCHD3P1-201ENST00000425516 676 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 IFNNP1-201ENST00000429219 553 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 DLGAP5P1-201ENST00000430307 464 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC245047.1-201ENST00000433276 873 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 SLAMF6P1-201ENST00000451067 602 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 RPL12P26-201ENST00000452430 487 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 USP9YP10-201ENST00000454868 628 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 RBMY2EP-202ENST00000456360 940 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 GAPDHP36-201ENST00000480688 918 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC026782.2-201ENST00000510845 636 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC116353.3-201ENST00000511215 249 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 USP9YP5-201ENST00000511770 630 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 MTATP6P1-201ENST00000514057 681 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC023632.1-201ENST00000518463 375 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.39□□□□□ -1.39
GFRA1P56159 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC124293.1-201ENST00000530034 493 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC090115.2-201ENST00000548060 883 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 DUX4L52-201ENST00000549363 777 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AL135978.1-201ENST00000553618 1266 ntBASIC6.39□□□□□ -1.39
GFRA1P56159 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.39□□□□□ -1.39
GFRA1P56159 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms