Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 AC005726.4-201ENST00000582858 458 ntBASIC5.55□□□□□ -1.52
SOX2P48431 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 AC019257.2-201ENST00000605539 497 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 RNU6-1192P-201ENST00000612197 107 ntBASIC5.55□□□□□ -1.52
SOX2P48431 RNU6-489P-201ENST00000618289 107 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC241377.1-201ENST00000619797 406 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 AC090617.9-201ENST00000623751 147 ntBASIC5.55□□□□□ -1.52
SOX2P48431 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.55□□□□□ -1.52
SOX2P48431 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 AC116667.2-201ENST00000641075 823 ntBASIC5.55□□□□□ -1.52
SOX2P48431 AL121768.1-201ENST00000613917 2544 ntBASIC5.55□□□□□ -1.52
SOX2P48431 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 AC125238.2-201ENST00000430003 1440 ntBASIC5.55□□□□□ -1.52
SOX2P48431 HSPD1P14-201ENST00000432666 1618 ntBASIC5.55□□□□□ -1.52
SOX2P48431 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.55□□□□□ -1.52
SOX2P48431 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.55□□□□□ -1.52
SOX2P48431 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SOX2P48431 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SOX2P48431 AC022164.1-201ENST00000568767 2673 ntBASIC5.54□□□□□ -1.52
SOX2P48431 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 NCOA4P2-201ENST00000340589 1813 ntBASIC5.54□□□□□ -1.52
SOX2P48431 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 PPIAP24-201ENST00000328558 471 ntBASIC5.54□□□□□ -1.52
SOX2P48431 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 U3.52-201ENST00000384034 216 ntBASIC5.54□□□□□ -1.52
SOX2P48431 SNORD65-201ENST00000391079 73 ntBASIC5.54□□□□□ -1.52
SOX2P48431 ANAPC10P1-201ENST00000395991 556 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC007068.1-201ENST00000396690 844 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL391419.1-201ENST00000398901 1275 ntBASIC5.54□□□□□ -1.52
SOX2P48431 RPL7P58-201ENST00000402913 758 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC024937.2-201ENST00000411669 1242 ntBASIC5.54□□□□□ -1.52
SOX2P48431 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 RPL18AP14-201ENST00000417685 526 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 GRPEL2P2-201ENST00000421856 670 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 HMGB3P5-201ENST00000428894 612 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 AC239800.1-201ENST00000442049 719 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 RPL7P33-201ENST00000444159 742 ntBASIC5.54□□□□□ -1.52
SOX2P48431 UBBP5-201ENST00000446970 266 ntBASIC5.54□□□□□ -1.52
SOX2P48431 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 RPL7P55-201ENST00000450522 746 ntBASIC5.54□□□□□ -1.52
SOX2P48431 RPS27AP3-201ENST00000453803 454 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX2P48431 VPS25P1-201ENST00000455691 508 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC008379.1-201ENST00000463655 464 ntBASIC5.54□□□□□ -1.52
SOX2P48431 RPSAP37-201ENST00000470913 821 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL355032.1-201ENST00000472981 438 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC008410.1-201ENST00000483777 339 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AF305872.1-201ENST00000485217 471 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AC021087.2-201ENST00000504656 1203 ntBASIC5.54□□□□□ -1.52
SOX2P48431 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 Y_RNA.717-201ENST00000517106 92 ntBASIC5.54□□□□□ -1.52
SOX2P48431 RNA5SP400-201ENST00000517155 111 ntBASIC5.54□□□□□ -1.52
SOX2P48431 COX6B1P4-201ENST00000519826 484 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC034205.1-201ENST00000520621 638 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC021451.1-201ENST00000523498 1129 ntBASIC5.54□□□□□ -1.52
SOX2P48431 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 AP003066.2-201ENST00000529375 555 ntBASIC5.54□□□□□ -1.52
SOX2P48431 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AC084851.2-201ENST00000530377 364 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX2P48431 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX2P48431 AC126323.4-201ENST00000566935 234 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC090651.1-201ENST00000567865 634 ntBASIC5.54□□□□□ -1.52
SOX2P48431 MTATP6P24-201ENST00000576835 677 ntBASIC5.54□□□□□ -1.52
SOX2P48431 DHFRP1-201ENST00000579682 559 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 EIF1P5-201ENST00000585002 234 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX2P48431 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX2P48431 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX2P48431 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX2P48431 AF230666.2-201ENST00000602328 725 ntBASIC5.54□□□□□ -1.52
SOX2P48431 AC112503.1-201ENST00000608436 391 ntBASIC5.54□□□□□ -1.52
SOX2P48431 MIR6737-201ENST00000617385 70 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms