Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC108161.1-201ENST00000461060 402 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC026254.2-201ENST00000475295 371 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 CBX1P5-201ENST00000475330 559 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 RN7SL547P-201ENST00000490793 290 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.95□□□□□ -1.3
TM4SF4P48230 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.95□□□□□ -1.3
TM4SF4P48230 AC095057.1-201ENST00000507583 168 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.95□□□□□ -1.3
TM4SF4P48230 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.95□□□□□ -1.3
TM4SF4P48230 HMGN2P6-201ENST00000551091 273 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC004825.1-201ENST00000555068 586 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 DPPA2P4-201ENST00000563717 878 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.95□□□□□ -1.3
TM4SF4P48230 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.95□□□□□ -1.3
TM4SF4P48230 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.95□□□□□ -1.3
TM4SF4P48230 AL953862.2-201ENST00000603089 820 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC005972.3-201ENST00000606304 481 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.95□□□□□ -1.3
TM4SF4P48230 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TM4SF4P48230 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.95□□□□□ -1.3
TM4SF4P48230 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TM4SF4P48230 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TM4SF4P48230 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.95□□□□□ -1.3
TM4SF4P48230 AC024587.1-201ENST00000505925 2157 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TM4SF4P48230 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TM4SF4P48230 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
TM4SF4P48230 UG0898H09-202ENST00000623646 7040 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 AC024341.1-201ENST00000526444 1552 ntBASIC6.95□□□□□ -1.3
TM4SF4P48230 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC005332.9-201ENST00000620266 2921 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 OR10AB1P-202ENST00000641219 1686 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TM4SF4P48230 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 RNA5SP478-201ENST00000364657 115 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 SNRPEP6-201ENST00000407465 277 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.94□□□□□ -1.3
TM4SF4P48230 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AL450996.1-201ENST00000445574 1202 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AL049829.1-201ENST00000465411 156 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 HIGD1AP14-201ENST00000507617 282 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 CDC42P3-201ENST00000518493 633 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AL445222.1-201ENST00000607259 628 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC068870.2-201ENST00000620635 389 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 AL356490.1-201ENST00000623079 479 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TM4SF4P48230 AC138915.4-201ENST00000565549 4147 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.94□□□□□ -1.3
TM4SF4P48230 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TM4SF4P48230 MTND4P21-201ENST00000453886 1357 ntBASIC6.94□□□□□ -1.3
TM4SF4P48230 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.94□□□□□ -1.3
TM4SF4P48230 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TM4SF4P48230 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.93□□□□□ -1.3
TM4SF4P48230 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
TM4SF4P48230 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.93□□□□□ -1.3
TM4SF4P48230 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.93□□□□□ -1.3
TM4SF4P48230 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.93□□□□□ -1.3
TM4SF4P48230 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
TM4SF4P48230 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.93□□□□□ -1.3
TM4SF4P48230 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
TM4SF4P48230 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TM4SF4P48230 RNA5SP507-201ENST00000363603 121 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms