Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 EIF4A2P5-201ENST00000529914 499 ntBASIC7.45□□□□□ -1.22
RFC4P35249 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.45□□□□□ -1.22
RFC4P35249 AC024940.4-201ENST00000605507 246 ntBASIC7.45□□□□□ -1.22
RFC4P35249 AL512329.2-201ENST00000607350 548 ntBASIC7.45□□□□□ -1.22
RFC4P35249 uc_338.26-201ENST00000612659 160 ntBASIC7.45□□□□□ -1.22
RFC4P35249 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.45□□□□□ -1.22
RFC4P35249 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RFC4P35249 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 AC092821.2-201ENST00000545710 2042 ntBASIC7.45□□□□□ -1.22
RFC4P35249 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.45□□□□□ -1.22
RFC4P35249 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RFC4P35249 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RFC4P35249 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.45□□□□□ -1.22
RFC4P35249 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.44□□□□□ -1.22
RFC4P35249 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RFC4P35249 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.44□□□□□ -1.22
RFC4P35249 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 MIR585-201ENST00000384887 94 ntBASIC7.44□□□□□ -1.22
RFC4P35249 RN7SKP216-201ENST00000411050 312 ntBASIC7.44□□□□□ -1.22
RFC4P35249 RPL35AP24-201ENST00000413846 330 ntBASIC7.44□□□□□ -1.22
RFC4P35249 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.44□□□□□ -1.22
RFC4P35249 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 RPS27AP3-201ENST00000453803 454 ntBASIC7.44□□□□□ -1.22
RFC4P35249 MRE11P1-201ENST00000464884 2127 ntBASIC7.44□□□□□ -1.22
RFC4P35249 RN7SL352P-201ENST00000466002 277 ntBASIC7.44□□□□□ -1.22
RFC4P35249 AC005532.2-201ENST00000467154 373 ntBASIC7.44□□□□□ -1.22
RFC4P35249 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.44□□□□□ -1.22
RFC4P35249 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 HIGD1AP14-201ENST00000507617 282 ntBASIC7.44□□□□□ -1.22
RFC4P35249 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC7.44□□□□□ -1.22
RFC4P35249 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 AC015720.2-201ENST00000567709 334 ntBASIC7.44□□□□□ -1.22
RFC4P35249 TXNP4-201ENST00000575018 310 ntBASIC7.44□□□□□ -1.22
RFC4P35249 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
RFC4P35249 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.44□□□□□ -1.22
RFC4P35249 AC116651.1-201ENST00000609724 556 ntBASIC7.44□□□□□ -1.22
RFC4P35249 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 MIR8080-201ENST00000622224 89 ntBASIC7.44□□□□□ -1.22
RFC4P35249 AL390318.1-201ENST00000624564 687 ntBASIC7.44□□□□□ -1.22
RFC4P35249 AC087269.2-201ENST00000641764 975 ntBASIC7.44□□□□□ -1.22
RFC4P35249 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RFC4P35249 AL033543.1-201ENST00000623440 13454 ntBASIC7.44□□□□□ -1.22
RFC4P35249 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.44□□□□□ -1.22
RFC4P35249 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RFC4P35249 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.43□□□□□ -1.22
RFC4P35249 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.43□□□□□ -1.22
RFC4P35249 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RFC4P35249 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.43□□□□□ -1.22
RFC4P35249 MIR223-201ENST00000385204 110 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AC009804.1-201ENST00000400949 179 ntBASIC7.43□□□□□ -1.22
RFC4P35249 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.43□□□□□ -1.22
RFC4P35249 EEF1B2P5-201ENST00000444820 548 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AL450996.1-201ENST00000445574 1202 ntBASIC7.43□□□□□ -1.22
RFC4P35249 RAB28P2-201ENST00000454299 641 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.43□□□□□ -1.22
RFC4P35249 CDC42P3-201ENST00000518493 633 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.43□□□□□ -1.22
RFC4P35249 GARSP1-201ENST00000570895 719 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AC010245.2-201ENST00000606908 1167 ntBASIC7.43□□□□□ -1.22
RFC4P35249 AL021368.3-201ENST00000607119 578 ntBASIC7.43□□□□□ -1.22
RFC4P35249 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.43□□□□□ -1.22
RFC4P35249 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.43□□□□□ -1.22
RFC4P35249 AC007842.1-201ENST00000597336 2039 ntBASIC7.43□□□□□ -1.22
RFC4P35249 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.43□□□□□ -1.22
RFC4P35249 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.43□□□□□ -1.22
RFC4P35249 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RFC4P35249 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
RFC4P35249 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.42□□□□□ -1.22
RFC4P35249 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.42□□□□□ -1.22
RFC4P35249 AC025470.1-201ENST00000510053 2032 ntBASIC7.42□□□□□ -1.22
RFC4P35249 AC011369.2-201ENST00000624423 1567 ntBASIC7.42□□□□□ -1.22
RFC4P35249 AL161756.3-201ENST00000641216 2071 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms